Stem-loop bta-mir-2904-1

Accession

MI0013080

Description

Bos taurus bta-mir-2904-1 precursor miRNA

Literature search

4 open access papers mention bta-mir-2904-1
(6 sentences)

Sequence

11057 reads, 1158 reads per million, 73 experiments

acggcagcgccgcGGGAGCCUCGGUUGGCCUCggauagccggucccccgccguccccgccggcgggccgu
(((((..(((((((((.((..(((..((((..((....))))))..)))..)).)))).))))).)))))

Structure

     ag     -    A  CU   UU    UC  a 
acggc  cgccg cGGG GC  CGG  GGCC  gg u
|||||  ||||| |||| ||  |||  ||||  ||  
ugccg  gcggc gccc ug  gcc  cugg  cc a
     -g     c    c  cc   cc    --  g 

Annotation confidence Low

Genome context

chr2: 66499624-66499693 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2904-1

Mature bta-miR-2904

• Accession: MIMAT0013862
• Description: Bos taurus bta-miR-2904 mature miRNA
• Sequence: 14 - GGGAGCCUCGGUUGGCCUC - 32
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443