Stem-loop bta-mir-148c

Accession

MI0015944

Description

Bos taurus bta-mir-148c precursor miRNA

Literature search

17 open access papers mention bta-mir-148c
(28 sentences)

Sequence

529018 reads, 236.0 reads per million, 150 experiments

cgggcCCAAGUUCUGUCAUGCACUGAcugcuccagagcccgAGUCGGAGUGUAUCACAGAACCUgggccgg
..((((((.(((((((.(((((((..((((((........))).)))))))))).))))))).))))))..

Structure

cg      A       C       GA   -   cag 
  ggcCCA GUUCUGU AUGCACU  cug cuc   a
  |||||| ||||||| |||||||  ||| |||    
  ccgggU CAAGACA UAUGUGA  GGC GAg   g
gg      C       C       --   U   ccc 

Annotation confidence Medium

Genome context

19: 38444482-38444552 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-148c

Mature bta-miR-148c-5p

• Accession: MIMAT0016933
• Description: Bos taurus bta-miR-148c-5p mature miRNA
• Sequence: 6 - CCAAGUUCUGUCAUGCACUGA - 26
• Evidence: experimental ; cloned [1]

Mature bta-miR-148c-3p

• Accession: MIMAT0050964
• Description: Bos taurus bta-miR-148c-3p mature miRNA
• Sequence: 42 - AGUCGGAGUGUAUCACAGAACCU - 64
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443