miRBase entry: bta-mir-148c

Stem-loop bta-mir-148c

Accession

MI0015944

Description

Bos taurus bta-mir-148c precursor miRNA

Literature search

16 open access papers mention bta-mir-148c
(27 sentences)

Sequence

36446 reads, 1 reads per million, 70 experiments

cgggcCCAAGUUCUGUCAUGCACUGAcugcuccagagcccgagucggaguguaucacagaaccugggccgg
..((((((.(((((((.(((((((..((((((........))).)))))))))).))))))).))))))..

Structure

cg      A       C       GA   -   cag 
  ggcCCA GUUCUGU AUGCACU  cug cuc   a
  |||||| ||||||| |||||||  ||| |||    
  ccgggu caagaca uauguga  ggc gag   g
gg      c       c       --   u   ccc

Annotation confidence Not enough data

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Genome context

chr19: 39247037-39247107 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-148c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bta-miR-148c

Accession	MIMAT0016933
Description	Bos taurus bta-miR-148c mature miRNA
Sequence	6 - CCAAGUUCUGUCAUGCACUGA - 26
Evidence	experimental cloned [1]

References

PubMed ID: 19765282
Identification and characterization of miRNAs expressed in the bovine ovary
Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
BMC Genomics (2009) 10:443