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miRBase |
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Stem-loop sequence ssc-mir-193a |
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Accession | MI0013113 (change log) | ||||
Description | Sus scrofa miR-193a stem-loop | ||||
Gene family | MIPF0000082; mir-193 | ||||
Literature search |
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7 open access papers mention ssc-mir-193a | ||||
Stem-loop |
gcg a u cg g a ggu 5' gg gcugagggcuggg cuuug ggc ag ugag g || ||||||||||||| ||||| ||| || |||| 3' cc cggcuccugaccc gaaac ccg uc acuu u --- - u au g a ggu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-193a-5p |
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Accession | MIMAT0013894 |
Sequence |
16 - ugggucuuugcgggcgagauga - 37 |
Deep sequencing | 100 reads, 11 experiments |
Evidence | experimental; Illumina [1,3-4] |
Mature sequence ssc-miR-193a-3p |
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Accession | MIMAT0013895 |
Sequence |
50 - aacuggccuacaaagucccagu - 71 |
Deep sequencing | 48 reads, 8 experiments |
Evidence | experimental; Illumina [1,3-4], cloned [2] |
References |
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1 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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2 |
PMID:20180025
"Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue"
Mol Biol Rep. 37:3567-3574(2010).
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3 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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4 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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