miRBase entry: ssc-mir-208b

Stem-loop ssc-mir-208b


Accession
MI0013129
Description
Sus scrofa ssc-mir-208b precursor miRNA
Gene family
MIPF0000178; mir-208

Literature search
11 open access papers mention ssc-mir-208b
(30 sentences)

Sequence

cucucagggaagcuuuuugcucgcguuauguuucucauccgaauAUAAGACGAACAAAAGGUUUGUcugagggcagagug
((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).......

Structure
-------        g          c   cg        cu 
       cucucagg aagcuuuuug ucg  uuauguuu  c
       |||||||| |||||||||| |||  ||||||||  a
       gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gugagac        G          A   AG        cc 


Annotation confidence Not enough data
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Genome context
chr7: 81071323-81071402 [-]

Database links

Mature ssc-miR-208b

Accession MIMAT0013912
Description Sus scrofa ssc-miR-208b mature miRNA
Sequence 45 - AUAAGACGAACAAAAGGUUUGU - 66
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328