Accession
MI0013139
Description
Sus scrofa
ssc-mir-497 precursor miRNA
Literature search
13 open access papers mention ssc-mir-497
(27 sentences)
(27 sentences)
Sequence
552678
reads,
295.0
reads per million, 206 experiments
cccgcccCAGCAGCACACUGUGGUUUGUAcggcacuguggccacgucCAAACCACACUGUGGUGUUagagcgaggguggg
((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).)))))))
((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).)))))))
Structure
- ----- G C U -- ac
cccgccc C AGCA CACA UGUGGUUUG Ac ggc u
||||||| | |||| |||| ||||||||| || |||
ggguggg g UUGU GUGU ACACCAAAC ug ccg g
a cgaga G C c ca gu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr12: 54717025-54717104 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-497
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-497-5p
| Accession | MIMAT0013926 |
| Description | Sus scrofa ssc-miR-497-5p mature miRNA |
| Sequence | 8 - CAGCAGCACACUGUGGUUUGUA - 29 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
Mature ssc-miR-497-3p
| Accession | MIMAT0052630 |
| Description | Sus scrofa ssc-miR-497-3p mature miRNA |
| Sequence | 48 - CAAACCACACUGUGGUGUU - 66 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
References
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