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miRBase |
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Stem-loop sequence zma-MIR159k |
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Accession | MI0013191 (change log) | |||||
Description | Zea mays miR159k stem-loop | |||||
Gene family | MIPF0000010; MIR159 | |||||
Literature search |
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31 open access papers mention zma-MIR159k | |||||
Stem-loop |
-- u a uaaa cu -u - a a g u guuc ugu ucagagagagagaagauc 5' gg gcucccuucaa ccaa cggucgau ga ggg uggu ca cu cucg ucaug ccac cccaucuca g || ||||||||||| |||| |||||||| || ||| |||| || || |||| ||||| |||| ||||||||| 3' uc cgagggaaguu gguu gccaguug cu ccc gcua gu ga gagc aguac ggug ggguagagu u cg u a uguc -- uc u c c g c guuu uuc ucguagagagcgagagag |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence zma-miR159k-5p |
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Accession | MIMAT0015315 |
Previous IDs | zma-miR159k* |
Sequence |
2 - gugcucccuucaaaccaauaa - 22 |
Evidence | experimental; Illumina [1] |
Mature sequence zma-miR159k-3p |
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Accession | MIMAT0013980 |
Previous IDs | zma-miR159k |
Sequence |
179 - uuuggauugaagggagcucug - 199 |
Deep sequencing | 9378 reads, 190 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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