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miRBase |
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Stem-loop sequence zma-MIR171n |
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Accession | MI0013208 (change log) | ||||
Description | Zea mays miR171n stem-loop | ||||
Gene family | MIPF0000030; MIR171_1 | ||||
Literature search |
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20 open access papers mention zma-MIR171n | ||||
Stem-loop |
-- a c a a 5' auauuggug gguucaauc gauguu gguuuuaca a ||||||||| ||||||||| |||||| ||||||||| a 3' uauaaccgc ccgaguuag cuauga cuaaaaugu g uc g u - c |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR171n-5p |
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Accession | MIMAT0015332 |
Previous IDs | zma-miR171n* |
Sequence |
2 - uauuggugagguucaauccga - 22 |
Deep sequencing | 11 reads, 5 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence zma-miR171n-3p |
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Accession | MIMAT0013997 |
Previous IDs | zma-miR171n |
Sequence |
57 - ugauugagccgcgccaauauc - 77 |
Deep sequencing | 2198 reads, 130 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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