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miRBase |
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Stem-loop sequence zma-MIR390a |
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Accession | MI0013209 (change log) | ||||
Description | Zea mays miR390a stem-loop | ||||
Gene family | MIPF0000101; MIR390 | ||||
Literature search |
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14 open access papers mention zma-MIR390a | ||||
Stem-loop |
-- a g cua aaacac u - --gc --a -- ga u g 5' g agcucagga ggauagcgc gga auaga cggagccg gcc gaggagaa gaaag agccaaga uaugug gau a | ||||||||| ||||||||| ||| ||||| |||||||| ||| |||||||| ||||| |||||||| |||||| ||| a 3' c ucgaguccu ucuaucgcg ucu uaucu gucuuggu cgg cuccucuu uuuuc ucgguucu guacau cua u ca c a aag ---aac - g aggu gug ga ag - a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR390a-5p |
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Accession | MIMAT0013998 |
Previous IDs | zma-miR390a |
Sequence |
2 - aagcucaggagggauagcgcc - 22 |
Deep sequencing | 1075 reads, 116 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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Mature sequence zma-miR390a-3p |
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Accession | MIMAT0015333 |
Previous IDs | zma-miR390a* |
Sequence |
160 - cgcuaucuauccugagcucca - 180 |
Deep sequencing | 124 reads, 9 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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