Stem-loop zma-MIR395g

Accession

MI0013215

Description

Zea mays zma-MIR395g precursor miRNA

Literature search

18 open access papers mention zma-MIR395g
(85 sentences)

Sequence

2 reads, 6 reads per million, 2 experiments

aGUUCUAUGCAAGCACUUCACGAggcauuguuucaagagcuuuuGUGAAGUGUUUGGGGGAACUCu
((((((.(.(((((((((((((((((.((......)).)).))))))))))))))).)))))))..

Structure

--      A G               -  a  gu 
  aGUUCU U CAAGCACUUCACGAg gc uu  u
  |||||| | ||||||||||||||| || ||   
  UCAAGG G GUUUGUGAAGUGuuu cg ga  u
uC      - G               u  a  ac 

Annotation confidence Not enough data

Genome context

chr2: 6277107-6277172 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from zma-MIR395g

Mature zma-miR395g-5p

• Accession: MIMAT0015339
• Description: Zea mays zma-miR395g-5p mature miRNA
• Sequence: 2 - GUUCUAUGCAAGCACUUCACGA - 23
• Evidence: experimental ; Illumina [1]

Mature zma-miR395g-3p

• Accession: MIMAT0014004
• Description: Zea mays zma-miR395g-3p mature miRNA
• Sequence: 45 - GUGAAGUGUUUGGGGGAACUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716