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miRBase |
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Stem-loop sequence zma-MIR396f |
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Accession | MI0013226 (change log) | ||||
Description | Zea mays miR396f stem-loop | ||||
Gene family | MIPF0000047; MIR396 | ||||
Literature search |
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22 open access papers mention zma-MIR396f | ||||
Stem-loop |
-- a u uucuucucucuuggaacggcagcuuuc 5' uuuccacagcuuucuuga cuuc ucuuc u |||||||||||||||||| |||| ||||| u 3' aagggugucgaaagaacu gaag agaag c ag g c ccucuacucucucucucucugucuaag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR396f-5p |
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Accession | MIMAT0014015 |
Previous IDs | zma-miR396f |
Sequence |
2 - uuccacagcuuucuugaacuu - 22 |
Deep sequencing | 824 reads, 113 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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Mature sequence zma-miR396f-3p |
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Accession | MIMAT0015350 |
Previous IDs | zma-miR396f* |
Sequence |
96 - ggucaagaaagcugugggaag - 116 |
Deep sequencing | 262 reads, 12 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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