Stem-loop aae-let-7

Accession

MI0013505

Description

Aedes aegypti aae-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

4 open access papers mention aae-let-7
(15 sentences)

Sequence

1461574 reads, 74124 reads per million, 2 experiments

cacguUGAGGUAGUUGGUUGUAUAGUagugacugauuaaauaucugcuaugcaaucugcuagcuugucgug
((((..(((.((((.(((((((((((((...............))))))))))))).)))).)))..))))

Structure

    uU   G    U             ugacug 
cacg  GAG UAGU GGUUGUAUAGUag      a
||||  ||| |||| |||||||||||||      u
gugc  uuc aucg cuaacguaucguc      u
    ug   g    u             uauaaa 

Annotation confidence Not enough data

Genome context

supercont1.43: 1156326-1156396 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aae-let-7

Mature aae-let-7

• Accession: MIMAT0014299
• Description: Aedes aegypti aae-let-7 mature miRNA
• Sequence: 6 - UGAGGUAGUUGGUUGUAUAGU - 26
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581