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Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs |
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|---|---|
| PubMed ID | 19961592 |
| Authors | Li S, Mead EA, Liang S, Tu Z |
| Journal | BMC Genomics |
| Volume | 10 |
| Pages | 581 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| aae-mir-184 | MI0013433 | 86688 | supercont1.496 | 143366 | 143453 | - | - |
| aae-mir-275 | MI0013434 | 35700 | supercont1.24 | 486536 | 486618 | + | High |
| aae-mir-277 | MI0013435 | 956 | supercont1.265 | 508799 | 508893 | + | High |
| aae-mir-9c | MI0013436 | 287 | None | None | - | ||
| aae-mir-8 | MI0013437 | 10753 | supercont1.411 | 876043 | 876121 | + | High |
| aae-mir-252 | MI0013438 | 2550 | supercont1.56 | 1580021 | 1580091 | - | High |
| aae-bantam | MI0013439 | 2493 | supercont1.49 | 1579552 | 1579622 | - | High |
| aae-mir-71 | MI0013440 | 8198 | supercont1.268 | 889378 | 889454 | - | High |
| aae-mir-276-1 | MI0013441 | 35626 | supercont1.134 | 38970 | 39060 | + | High |
| aae-mir-317-1 | MI0013442 | 18155 | supercont1.153 | 2154700 | 2154791 | - | - |
| aae-mir-2a | MI0013443 | 1891 | supercont1.268 | 888581 | 888677 | - | High |
| aae-mir-998 | MI0013444 | 691 | supercont1.744 | 322280 | 322371 | + | - |
| aae-mir-92a | MI0013445 | 625 | supercont1.116 | 1267202 | 1267283 | + | High |
| aae-mir-306 | MI0013446 | 110 | supercont1.785 | 213059 | 213187 | + | High |
| aae-mir-281 | MI0013447 | 1377 | supercont1.957 | 134442 | 134538 | + | High |
| aae-mir-1889 | MI0013448 | 141 | supercont1.68 | 2720794 | 2720921 | - | High |
| aae-mir-278 | MI0013450 | 124 | supercont1.16 | 3596261 | 3596341 | + | High |
| aae-mir-989 | MI0013451 | 10 | supercont1.115 | 804160 | 804274 | - | - |
| aae-mir-14 | MI0013452 | 1619 | supercont1.249 | 1088962 | 1089134 | - | - |
| aae-mir-11 | MI0013453 | 1495 | supercont1.744 | 321996 | 322109 | + | High |
| aae-mir-190 | MI0013454 | 4120 | supercont1.195 | 82191 | 82291 | - | - |
| aae-mir-1 | MI0013455 | 530586 | supercont1.812 | 291326 | 291401 | + | - |
| aae-mir-34 | MI0013456 | 45559 | supercont1.265 | 509521 | 509649 | + | High |
| aae-mir-1890 | MI0013457 | 167 | supercont1.204 | 1733300 | 1733385 | + | - |
| aae-mir-957 | MI0013458 | 2818 | supercont1.7 | 464288 | 464365 | + | - |
| aae-mir-305 | MI0013459 | 1831 | supercont1.24 | 495587 | 495674 | + | High |
| aae-mir-996 | MI0013460 | 6016 | supercont1.437 | 567493 | 567590 | - | - |
| aae-mir-87 | MI0013461 | 137 | supercont1.360 | 1010781 | 1010887 | + | - |
| aae-mir-12 | MI0013462 | 1123 | supercont1.68 | 2720396 | 2720497 | - | High |
| aae-mir-13 | MI0013463 | 756 | supercont1.268 | 888736 | 888819 | - | High |
| aae-mir-999 | MI0013464 | 1413 | supercont1.100 | 2315100 | 2315178 | + | High |
| aae-mir-125 | MI0013465 | 3408 | supercont1.43 | 1156595 | 1156689 | + | - |
| aae-mir-308 | MI0013466 | 730 | supercont1.107 | 508970 | 509045 | + | High |
| aae-mir-315 | MI0013467 | 1105 | supercont1.612 | 104128 | 104219 | + | High |
| aae-mir-1891-1 | MI0013468 | 1417 | supercont1.199 | 1109700 | 1109786 | - | - |
| aae-mir-1891-2 | MI0013469 | 1417 | supercont1.466 | 72785 | 72876 | + | - |
| aae-mir-1175 | MI0013470 | 4 | supercont1.125 | 1648025 | 1648108 | + | - |
| aae-mir-1174 | MI0013471 | 0 | supercont1.125 | 1647825 | 1647942 | + | - |
| aae-mir-993 | MI0013472 | 863 | supercont1.1056 | 256781 | 256881 | + | - |
| aae-mir-981 | MI0013473 | 998 | supercont1.127 | 638368 | 638458 | - | - |
| aae-mir-965 | MI0013474 | 29 | supercont1.51 | 2008650 | 2008728 | + | - |
| aae-mir-932 | MI0013475 | 4908 | supercont1.1064 | 154098 | 154192 | - | High |
| aae-mir-927 | MI0013476 | 1440 | supercont1.26 | 2065412 | 2065487 | + | - |
| aae-mir-309a-1 | MI0013477 | 0 | supercont1.150 | 907874 | 907965 | + | - |
| aae-mir-309a-2 | MI0013478 | 0 | supercont1.602 | 94025 | 94115 | + | - |
| aae-mir-285 | MI0013479 | 6085 | supercont1.23 | 3339127 | 3339230 | - | - |
| aae-mir-137-1 | MI0013480 | 586 | supercont1.1191 | 97782 | 97885 | + | - |
| aae-mir-137-2 | MI0013481 | 586 | supercont1.137 | 260667 | 260769 | - | - |
| aae-mir-133 | MI0013482 | 179 | supercont1.778 | 350289 | 350407 | - | - |
| aae-mir-31 | MI0013483 | 1792 | supercont1.636 | 483181 | 483329 | - | - |
| aae-mir-10 | MI0013484 | 2248 | supercont1.440 | 813543 | 813631 | + | - |
| aae-mir-iab-4-1 | MI0013485 | 7 | supercont1.423 | 763483 | 763556 | - | - |
| aae-mir-283 | MI0013486 | 217 | supercont1.68 | 2729329 | 2729431 | - | - |
| aae-mir-988 | MI0013487 | 49 | supercont1.442 | 623050 | 623124 | - | High |
| aae-mir-124 | MI0013488 | 14774 | supercont1.6 | 1664615 | 1664690 | - | - |
| aae-mir-2941-1 | MI0013491 | 2 | supercont1.385 | 413127 | 413232 | - | - |
| aae-mir-2941-2 | MI0013492 | 1 | supercont1.385 | 413436 | 413530 | - | - |
| aae-mir-33 | MI0013493 | 477 | supercont1.487 | 351648 | 351727 | + | High |
| aae-mir-279 | MI0013494 | 1911 | supercont1.437 | 572245 | 572339 | - | - |
| aae-mir-263a | MI0013495 | 10485 | supercont1.981 | 164938 | 165034 | - | High |
| aae-mir-7 | MI0013496 | 3173 | supercont1.1359 | 46026 | 46114 | + | - |
| aae-mir-100 | MI0013497 | 2715 | supercont1.43 | 1142154 | 1142279 | + | - |
| aae-mir-970 | MI0013498 | 7915 | supercont1.229 | 1045811 | 1045918 | + | - |
| aae-mir-210 | MI0013499 | 6560 | supercont1.512 | 515644 | 515711 | - | - |
| aae-mir-79 | MI0013500 | 336 | supercont1.785 | 213262 | 213357 | + | High |
| aae-mir-307 | MI0013501 | 68 | supercont1.16 | 1859419 | 1859509 | - | - |
| aae-mir-1000-1 | MI0013502 | 294 | supercont1.187 | 325456 | 325552 | + | - |
| aae-mir-1000-2 | MI0013503 | 294 | supercont1.3798 | 170 | 266 | - | - |
| aae-mir-375 | MI0013504 | 2 | supercont1.309 | 1318735 | 1318850 | - | - |
| aae-let-7 | MI0013505 | 74124 | supercont1.43 | 1156326 | 1156396 | + | - |
| aae-mir-2942 | MI0013506 | 0 | supercont1.245 | 212398 | 212479 | + | - |
| aae-mir-2943-1 | MI0013507 | 4 | supercont1.348 | 480917 | 480997 | + | - |
| aae-mir-2943-2 | MI0013508 | 4 | supercont1.348 | 481079 | 481149 | + | - |
| aae-mir-2944a | MI0013509 | 1 | supercont1.464 | 825450 | 825511 | + | - |
| aae-mir-2944b | MI0013510 | 13 | supercont1.464 | 825313 | 825374 | + | - |
| aae-mir-193 | MI0013511 | 339 | supercont1.519 | 717066 | 717189 | + | - |
| aae-mir-2b | MI0013512 | 1828 | supercont1.268 | 887244 | 887330 | - | - |
| aae-mir-219 | MI0013513 | 475 | supercont1.368 | 610327 | 610412 | + | - |
| aae-mir-2c | MI0013514 | 1759 | supercont1.268 | 889085 | 889162 | - | - |
| aae-mir-263b | MI0013515 | 244 | supercont1.28 | 2323832 | 2323922 | + | High |
| aae-mir-276-2 | MI0013516 | 35620 | supercont1.5 | 2769446 | 2769635 | - | - |
| aae-mir-282-1 | MI0013517 | 4 | supercont1.369 | 992964 | 993098 | + | - |
| aae-mir-282-2 | MI0013518 | 4 | supercont1.377 | 313203 | 313337 | - | - |
| aae-mir-286b-1 | MI0013519 | 0 | supercont1.150 | 907326 | 907422 | + | - |
| aae-mir-286b-2 | MI0013520 | 0 | supercont1.602 | 93476 | 93572 | + | - |
| aae-mir-286a | MI0013521 | 0 | supercont1.464 | 824995 | 825091 | + | - |
| aae-mir-2945 | MI0013522 | 16290 | supercont1.43 | 958687 | 958768 | + | High |
| aae-mir-316 | MI0013523 | 48 | supercont1.289 | 891276 | 891366 | - | - |
| aae-mir-317-2 | MI0013524 | 18155 | supercont1.265 | 429451 | 429538 | + | - |
| aae-mir-309b | MI0013526 | 1 | supercont1.464 | 825629 | 825699 | + | - |
| aae-mir-92b | MI0013527 | 394 | supercont1.116 | 1319150 | 1319232 | + | High |
| aae-mir-9a-1 | MI0013528 | 1337 | supercont1.517 | 555107 | 555187 | + | - |
| aae-mir-9a-2 | MI0013529 | 1337 | supercont1.517 | 574909 | 574989 | + | - |
| aae-mir-9b | MI0013530 | 52 | supercont1.785 | 213570 | 213661 | + | - |
| aae-mir-iab-4-2 | MI0013531 | 7 | supercont1.708 | 50256 | 50329 | + | - |
| aae-mir-2946 | MI0013532 | 2 | supercont1.385 | 413565 | 413652 | - | - |
| aae-mir-929-1 | MI0014710 | 129 | supercont1.260 | 788396 | 788483 | - | High |
| aae-mir-929-2 | MI0014711 | 129 | supercont1.2867 | 3294 | 3382 | + | High |