miRBase entry: 19961592

Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs

PubMed ID 19961592
Authors Li S, Mead EA, Liang S, Tu Z
Journal BMC Genomics
Volume 10
Pages 581

There are 98 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
aae-mir-184 MI0013433 86688 ref|NW_001811236.1| 143366 143453 - High
aae-mir-275 MI0013434 35700 ref|NW_001810937.1| 486536 486618 + Medium
aae-mir-277 MI0013435 956 ref|NW_001810977.1| 508799 508893 + High
aae-mir-9c MI0013436 287 ref|NW_001811557.1| 186226 186308 + High
aae-mir-8 MI0013437 10753 ref|NW_001811143.1| 876043 876121 + High
aae-mir-252 MI0013438 2550 ref|NW_001811307.1| 1580021 1580091 - High
aae-bantam MI0013439 2493 ref|NW_001811229.1| 1579552 1579622 - High
aae-mir-71 MI0013440 8198 ref|NW_001810981.1| 889378 889454 - High
aae-mir-276-1 MI0013441 35626 ref|NW_001810178.1| 38970 39060 + High
aae-mir-317-1 MI0013442 18155 ref|NW_001810977.1| 429449 429540 + Medium
aae-mir-2a MI0013443 1891 ref|NW_001810981.1| 888581 888677 - High
aae-mir-998 MI0013444 691 ref|NW_001811512.1| 322280 322371 + High
aae-mir-92a MI0013445 625 ref|NW_001809979.1| 1267202 1267283 + High
aae-mir-306 MI0013446 110 ref|NW_001811557.1| 213059 213187 + High
aae-mir-281 MI0013447 1377 ref|NW_001811747.1| 134442 134538 + High
aae-mir-1889 MI0013448 141 ref|NW_001811440.1| 2720794 2720921 - High
aae-mir-278 MI0013450 124 ref|NW_001810458.1| 3596261 3596341 + High
aae-mir-989 MI0013451 10 ref|NW_001809968.1| 804160 804274 - High
aae-mir-14 MI0013452 1619 ref|NW_001810954.1| 1088962 1089134 - High
aae-mir-11 MI0013453 1495 ref|NW_001811512.1| 321996 322109 + High
aae-mir-190 MI0013454 4120 ref|NW_001810750.1| 82191 82291 - High
aae-mir-1 MI0013455 530586 ref|NW_001811588.1| 291326 291401 + High
aae-mir-34 MI0013456 45559 ref|NW_001810977.1| 509521 509649 + High
aae-mir-1890 MI0013457 167 ref|NW_001810805.1| 1733300 1733385 + High
aae-mir-957 MI0013458 2818 ref|NW_001811462.1| 464288 464365 + High
aae-mir-305 MI0013459 1831 ref|NW_001810937.1| 495587 495674 + High
aae-mir-996 MI0013460 6016 ref|NW_001811171.1| 567493 567590 - High
aae-mir-87 MI0013461 137 ref|NW_001811086.1| 1010781 1010887 + High
aae-mir-12 MI0013462 1123 ref|NW_001811440.1| 2720396 2720497 - High
aae-mir-13 MI0013463 756 ref|NW_001810981.1| 888736 888819 - High
aae-mir-999 MI0013464 1413 ref|NW_001809803.1| 2315100 2315178 + High
aae-mir-125 MI0013465 3408 ref|NW_001811163.1| 1156595 1156689 + High
aae-mir-308 MI0013466 730 ref|NW_001809879.1| 508970 509045 + High
aae-mir-315 MI0013467 1105 ref|NW_001811366.1| 104128 104219 + High
aae-mir-1891-1 MI0013468 1417 ref|NW_001811203.1| 72787 72873 + High
aae-mir-1891-2 MI0013469 1417 ref|NW_001811203.1| 72785 72876 + High
aae-mir-1175 MI0013470 4 ref|NW_001810078.1| 1648025 1648108 + Medium
aae-mir-1174 MI0013471 0 ref|NW_001810078.1| 1647825 1647942 + High
aae-mir-993 MI0013472 863 ref|NW_001809864.1| 256781 256881 + High
aae-mir-981 MI0013473 998 ref|NW_001810100.1| 638368 638458 - High
aae-mir-965 MI0013474 29 ref|NW_001811252.1| 2008650 2008728 + High
aae-mir-932 MI0013475 4908 ref|NW_001809873.1| 154098 154192 - High
aae-mir-927 MI0013476 1440 ref|NW_001810970.1| 2065412 2065487 + High
aae-mir-309a-1 MI0013477 0 ref|NW_001811355.1| 94024 94115 + High
aae-mir-309a-2 MI0013478 0 ref|NW_001811355.1| 94025 94115 + High
aae-mir-285 MI0013479 6085 ref|NW_001810912.1| 3339127 3339230 - High
aae-mir-137-1 MI0013480 586 ref|NW_001810211.1| 260664 260767 - High
aae-mir-137-2 MI0013481 586 ref|NW_001810211.1| 260667 260769 - High
aae-mir-133 MI0013482 179 ref|NW_001811549.1| 350289 350407 - High
aae-mir-31 MI0013483 1792 ref|NW_001811392.1| 483181 483329 - High
aae-mir-10 MI0013484 2248 ref|NW_001811175.1| 813543 813631 + High
aae-mir-iab-4-1 MI0013485 7 ref|NW_001811156.1| 763483 763556 - Medium
aae-mir-283 MI0013486 217 ref|NW_001811440.1| 2729329 2729431 - High
aae-mir-988 MI0013487 49 ref|NW_001811177.1| 623050 623124 - High
aae-mir-124 MI0013488 14774 ref|NW_001811351.1| 1664615 1664690 - High
aae-mir-2941-1 MI0013491 2 ref|NW_001811113.1| 413127 413232 - High
aae-mir-2941-2 MI0013492 1 ref|NW_001811113.1| 413436 413530 - -
aae-mir-33 MI0013493 477 ref|NW_001811226.1| 351648 351727 + High
aae-mir-279 MI0013494 1911 ref|NW_001811171.1| 572245 572339 - High
aae-mir-263a MI0013495 10485 ref|NW_001811774.1| 164938 165034 - High
aae-mir-7 MI0013496 3173 ref|NW_001810199.1| 46026 46114 + High
aae-mir-100 MI0013497 2715 ref|NW_001811163.1| 1142154 1142279 + High
aae-mir-970 MI0013498 7915 ref|NW_001810909.1| 1045811 1045918 + High
aae-mir-210 MI0013499 6560 ref|NW_001811255.1| 515644 515711 - High
aae-mir-79 MI0013500 336 ref|NW_001811557.1| 213262 213357 + High
aae-mir-307 MI0013501 68 ref|NW_001810458.1| 1859419 1859509 - Medium
aae-mir-1000-1 MI0013502 294 ref|NW_001810696.1| 325456 325552 + Medium
aae-mir-1000-2 MI0013503 294 ref|NW_001835655.1| 170 266 - Medium
aae-mir-375 MI0013504 2 ref|NW_001811029.1| 1318735 1318850 - High
aae-let-7 MI0013505 74124 ref|NW_001811163.1| 1156326 1156396 + High
aae-mir-2942 MI0013506 0 ref|NW_001810947.1| 212398 212479 + Medium
aae-mir-2943-1 MI0013507 4 ref|NW_001811072.1| 480917 480997 + -
aae-mir-2943-2 MI0013508 4 ref|NW_001811072.1| 481079 481149 + -
aae-mir-2944a MI0013509 1 ref|NW_001811201.1| 825450 825511 + -
aae-mir-2944b MI0013510 13 ref|NW_001811201.1| 825313 825374 + Medium
aae-mir-193 MI0013511 339 ref|NW_001811262.1| 717066 717189 + High
aae-mir-2b MI0013512 1828 ref|NW_001810981.1| 887244 887330 - High
aae-mir-219 MI0013513 475 ref|NW_001811094.1| 610327 610412 + High
aae-mir-2c MI0013514 1759 ref|NW_001810981.1| 889085 889162 - High
aae-mir-263b MI0013515 244 ref|NW_001810996.1| 2323832 2323922 + High
aae-mir-276-2 MI0013516 35620 ref|NW_001811240.1| 2769446 2769635 - High
aae-mir-282-1 MI0013517 4 ref|NW_001811095.1| 992964 993098 + High
aae-mir-282-2 MI0013518 4 ref|NW_001811104.1| 313203 313337 - High
aae-mir-286b-1 MI0013519 0 ref|NW_001810351.1| 907326 907422 + High
aae-mir-286b-2 MI0013520 0 ref|NW_001811355.1| 93476 93572 + High
aae-mir-286a MI0013521 0 ref|NW_001811201.1| 824995 825091 + High
aae-mir-2945 MI0013522 16290 ref|NW_001811163.1| 958687 958768 + High
aae-mir-316 MI0013523 48 ref|NW_001811006.1| 891276 891366 - Medium
aae-mir-317-2 MI0013524 18155 ref|NW_001810977.1| 429451 429538 + Medium
aae-mir-309b MI0013526 1 ref|NW_001811201.1| 825629 825699 + -
aae-mir-92b MI0013527 394 ref|NW_001809979.1| 1319150 1319232 + High
aae-mir-9a-1 MI0013528 1337 ref|NW_001811260.1| 555107 555187 + High
aae-mir-9a-2 MI0013529 1337 ref|NW_001811260.1| 574909 574989 + High
aae-mir-9b MI0013530 52 ref|NW_001811557.1| 213570 213661 + High
aae-mir-iab-4-2 MI0013531 7 ref|NW_001811472.1| 50256 50329 + Medium
aae-mir-2946 MI0013532 2 ref|NW_001811113.1| 413565 413652 - High
aae-mir-929-1 MI0014710 129 ref|NW_001836586.1| 3294 3381 + High
aae-mir-929-2 MI0014711 129 ref|NW_001836586.1| 3294 3382 + High



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