Stem-loop aae-mir-219

Accession

MI0013513

Description

Aedes aegypti aae-mir-219 precursor miRNA

Literature search

3 open access papers mention aae-mir-219
(7 sentences)

Sequence

8813 reads, 30.0 reads per million, 78 experiments

uuucuagcucUGAUUGUCCAAACGCAAUUCUUGuuuuauucgaauaugauauccaAGAGUUGUGACUGGACAUCCGUGgcucgaaa
.(((.((((.((..((((((..(((((((((((..((((......))))....)))))))))))..))))))..)).)))).))).

Structure

u   u    c  AU      AA           --uu    uc 
 uuc agcu UG  UGUCCA  CGCAAUUCUUG    uuau  g
 ||| |||| ||  ||||||  |||||||||||    ||||   
 aag ucgG GC  ACAGGU  GUGUUGAGAac    agua  a
a   c    U  CU      CA           cuau    ua 

Annotation confidence High

Genome context

ref|NW_001811094.1|: 610327-610412 [+]

Mature aae-miR-219-5p

• Accession: MIMAT0014307
• Description: Aedes aegypti aae-miR-219-5p mature miRNA
• Sequence: 11 - UGAUUGUCCAAACGCAAUUCUUG - 33
• Evidence: experimental ; 454 [1]

Mature aae-miR-219-3p

• Accession: MIMAT0057360
• Description: Aedes aegypti aae-miR-219-3p mature miRNA
• Sequence: 56 - AGAGUUGUGACUGGACAUCCGUG - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581