Stem-loop aae-mir-2943-2

Accession

MI0013508

Description

Aedes aegypti aae-mir-2943-2 precursor miRNA

Literature search

2 open access papers mention aae-mir-2943-2
(9 sentences)

Sequence

78 reads, 4 reads per million, 2 experiments

gaugUUAAGUAGGCACUUGCAGGCAAAuuuguagcuuuaauaugauugacugcuuuuuccuacuuuacauu
(((((.(((((((.....((((.(((..(((((.......)))))))).)))).....))))))).)))))

Structure

     U       CACUU    G   Au     gc 
gaugU AAGUAGG     GCAG CAA  uugua  u
||||| |||||||     |||| |||  |||||  u
uuaca uucaucc     cguc guu  aguau  u
     u       uuuuu    a   --     aa 

Annotation confidence Not enough data

Genome context

supercont1.348: 481079-481149 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aae-mir-2943-2

Mature aae-miR-2943

• Accession: MIMAT0014301
• Description: Aedes aegypti aae-miR-2943 mature miRNA
• Sequence: 5 - UUAAGUAGGCACUUGCAGGCAAA - 27
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581