Stem-loop aae-mir-2943-1

Accession

MI0013507

Description

Aedes aegypti aae-mir-2943-1 precursor miRNA

Literature search

2 open access papers mention aae-mir-2943-1
(9 sentences)

Sequence

79 reads, 4 reads per million, 2 experiments

cccaauugaugUUAAGUAGGCACUUGCAGGCAAAguuucauucacaauuugacugcuuuuuccuaccuuacauugaguggg
((((.(((((((...(((((.....((((.((((.............)))).)))).....)))))...))))))).))))

Structure

    a       UAA     CACUU    G    guuuc 
ccca uugaugU   GUAGG     GCAG CAAA     a
|||| |||||||   |||||     |||| ||||     u
gggu aguuaca   caucc     cguc guuu     u
    g       uuc     uuuuu    a    aacac 

Annotation confidence Not enough data

Genome context

supercont1.348: 480917-480997 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aae-mir-2943-1

Mature aae-miR-2943

• Accession: MIMAT0014301
• Description: Aedes aegypti aae-miR-2943 mature miRNA
• Sequence: 12 - UUAAGUAGGCACUUGCAGGCAAA - 34
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581