Stem-loop aae-mir-276-2

Accession

MI0013516

Description

Aedes aegypti aae-mir-276-2 precursor miRNA

Literature search

2 open access papers mention aae-mir-276-2
(4 sentences)

Sequence

12773048 reads, 62626.0 reads per million, 91 experiments

ggugaagugugcaguaauuagugccagguagguuagauuuccagugucucgaguuaauccgucAGCGAGGUAUAGAGUUCCUAugcguucggauaaaauauuccaUAGGAACUUCAUACCGUGCUCUuggauugcuuggaagucaucgagaggguaaugguggaaguucguggcuaauuuguaaaucauc
(((((....((((..(((((..((((.(.......((((((((.(((.((((((.((((((..((((.(((((.(((((((((((.....(((((...)))))))))))))))).))))).))))..)))))))))))).....(((.....))).))).))))))))).)))))))))))))..)))))

Structure

     agug    gu     gu    g uagguua        g   ----------------c      u      uc    A     A           cguuc     a 
gguga    ugca  aauua  gcca g       gauuucca ugu                 ucgagu aauccg  AGCG GGUAU GAGUUCCUAug     ggaua  
|||||    ||||  |||||  |||| |       |||||||| |||                 |||||| ||||||  |||| ||||| |||||||||||     ||||| a
cuacu    augu  uuaau  cggu c       uugaaggu gua                 gguucg uuaggu  UCGU CCAUA UUCAAGGAUac     cuuau  
     --aa    --     --    g -------        g   augggagagcuacugaa      -      UC    G     C           -----     a 

Annotation confidence High

Genome context

ref|NW_001811240.1|: 2769446-2769635 [-]

Mature aae-miR-276-2-5p

• Accession: MIMAT0057362
• Description: Aedes aegypti aae-miR-276-2-5p mature miRNA
• Sequence: 64 - AGCGAGGUAUAGAGUUCCUA - 83
• Evidence: experimental ; 454 [1]

Mature aae-miR-276-3p

• Accession: MIMAT0014223
• Description: Aedes aegypti aae-miR-276-3p mature miRNA
• Sequence: 106 - UAGGAACUUCAUACCGUGCUCU - 127
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581