Stem-loop aae-mir-9a-1

Accession

MI0013528

Description

Aedes aegypti aae-mir-9a-1 precursor miRNA

Literature search

3 open access papers mention aae-mir-9a-1
(9 sentences)

Sequence

740268 reads, 3879.0 reads per million, 85 experiments

gucaaaguucUCUUUGGUUAUCUAGCUGUAUGAgugaauuuagaacaucaUAAAGCUAGCAUACCGAAGUUAauaguugac
(((((.(((..(((((((...((((((.(((((((.........)).))))).))))))...)))))))..)))..)))))

Structure

     -a   cU       UAU      G     -  gaa 
gucaa  guu  CUUUGGU   CUAGCU UAUGA gu   u
|||||  |||  |||||||   |||||| ||||| ||   u
caguu  uaA  GAAGCCA   GAUCGA AUacu ca   u
     ga   UU       UAC      A     a  aga 

Annotation confidence High

Genome context

ref|NW_001811260.1|: 555107-555187 [+]

Mature aae-miR-9a-5p

• Accession: MIMAT0014323
• Description: Aedes aegypti aae-miR-9a-5p mature miRNA
• Sequence: 11 - UCUUUGGUUAUCUAGCUGUAUGA - 33
• Evidence: experimental ; 454 [1]

Mature aae-miR-9a-3p

• Accession: MIMAT0057366
• Description: Aedes aegypti aae-miR-9a-3p mature miRNA
• Sequence: 51 - UAAAGCUAGCAUACCGAAGUUA - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581