Stem-loop aae-mir-282-1

Accession

MI0013517

Description

Aedes aegypti aae-mir-282-1 precursor miRNA

Literature search

2 open access papers mention aae-mir-282-1
(4 sentences)

Sequence

78 reads, 4 reads per million, 2 experiments

aucgucaucgucaucgucgcacagguguAAUCUAGCCUCUCCUAGGCUUUGUCUGuuaccuuccuugggaauuccacuagccagACAUAGCCUGACAGAGGUUAGGugaaaucugaaaagucaacggccaacggu
......(((((..((((.((.(((((...(((((((((((..((((((.((((((((((((.....)))........))).)))))).))))))..)))))))))))...)))))....))..))))...)))))

Structure

aucguc     -ca    -c  ---a     guA           CC      U      -   --------   u 
      aucgu   ucgu  gc    caggu   AUCUAGCCUCU  UAGGCU UGUCUG uua        ccu c
      |||||   ||||  ||    |||||   |||||||||||  |||||| |||||| |||        ||| c
      uggca   ggca  ug    gucua   uGGAUUGGAGA  GUCCGA ACAgac gau        ggg u
------     acc    ac  aaaa     aag           CA      U      c   caccuuaa   u 

Annotation confidence Low

Genome context

supercont1.369: 992964-993098 [+]

Mature aae-miR-282-5p

• Accession: MIMAT0014311
• Description: Aedes aegypti aae-miR-282-5p mature miRNA
• Sequence: 29 - AAUCUAGCCUCUCCUAGGCUUUGUCUG - 55
• Evidence: experimental ; 454 [1]

Mature aae-miR-282-3p

• Accession: MIMAT0014312
• Description: Aedes aegypti aae-miR-282-3p mature miRNA
• Sequence: 85 - ACAUAGCCUGACAGAGGUUAGG - 106
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581