Stem-loop aae-mir-2944b

Accession

MI0013510

Description

Aedes aegypti aae-mir-2944b precursor miRNA

Literature search

4 open access papers mention aae-mir-2944b
(6 sentences)

Sequence

244 reads, 12 reads per million, 2 experiments

aucGAAGGAACUCCCGGUGUGAUAUAugacucgauuaUAUCACAGCAGUAGUUACCUGAuau
.....(((((((.(.(.(((((((((.........))))))))).).).)))).))).....

Structure

aucGA   -    C C G         uga 
     AGG AACU C G UGUGAUAUA   c
     ||| |||| | | |||||||||   u
     UCC UUGA G C ACACUAUau   c
uauAG   A    U A G         uag 

Annotation confidence Not enough data

Genome context

supercont1.464: 825313-825374 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from aae-mir-2944b

Mature aae-miR-2944b-5p

• Accession: MIMAT0014304
• Description: Aedes aegypti aae-miR-2944b-5p mature miRNA
• Sequence: 4 - GAAGGAACUCCCGGUGUGAUAUA - 26
• Evidence: experimental ; 454 [1]

Mature aae-miR-2944b-3p

• Accession: MIMAT0015373
• Description: Aedes aegypti aae-miR-2944b-3p mature miRNA
• Sequence: 38 - UAUCACAGCAGUAGUUACCUGA - 59
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581