Stem-loop aae-mir-2b

Accession

MI0013512

Description

Aedes aegypti aae-mir-2b precursor miRNA

Literature search

6 open access papers mention aae-mir-2b
(13 sentences)

Sequence

557766 reads, 2381.0 reads per million, 84 experiments

gggcguauucuagACUCUCAAAGUGGCUGUGAAAUGguuuuauuuugcucaUAUCACAGCCAGCUUUGAUGAGCUggacugcgcacc
(((((((.(((((.((((((((((((((((((.(((((........)).))).))))))))).)))))).)))))))).))))).))

Structure

  -     u     A   -      -         A   -  uuu 
gg gcgua ucuag CUC UCAAAG UGGCUGUGA AUG gu   a
|| ||||| ||||| ||| |||||| ||||||||| ||| ||    
cc cgcgu aggUC GAG AGUUUC ACCGACACU Uac cg   u
  a     c     -   U      G         A   u  uuu 

Annotation confidence High

Genome context

ref|NW_001810981.1|: 887244-887330 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from aae-mir-2b

Mature aae-miR-2b-5p

• Accession: MIMAT0057359
• Description: Aedes aegypti aae-miR-2b-5p mature miRNA
• Sequence: 14 - ACUCUCAAAGUGGCUGUGAAAUG - 36
• Evidence: experimental ; 454 [1]

Mature aae-miR-2b-3p

• Accession: MIMAT0014306
• Description: Aedes aegypti aae-miR-2b-3p mature miRNA
• Sequence: 52 - UAUCACAGCCAGCUUUGAUGAGCU - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581