Stem-loop aae-mir-2944a

Accession

MI0013509

Description

Aedes aegypti aae-mir-2944a precursor miRNA

Sequence

14 reads, 1 reads per million, 2 experiments

cguuGAAGGAACUUCUGCUGUGAUCUGAguuagauacaUAUCACAGUAGUUGUACUUUAAug
((((((((..((..((((((((((.((.........)).))))))))))..)).))))))))

Structure

        GA  UU          C  Agu 
cguuGAAG  AC  CUGCUGUGAU UG   u
||||||||  ||  |||||||||| ||   a
guAAUUUC  UG  GAUGACACUA ac   g
        -A  UU          U  aua 

Annotation confidence Not enough data

Genome context

supercont1.464: 825450-825511 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from aae-mir-2944a

Mature aae-miR-2944a-5p

• Accession: MIMAT0014302
• Description: Aedes aegypti aae-miR-2944a-5p mature miRNA
• Sequence: 5 - GAAGGAACUUCUGCUGUGAUCUGA - 28
• Evidence: experimental ; 454 [1]

Mature aae-miR-2944a-3p

• Accession: MIMAT0014303
• Description: Aedes aegypti aae-miR-2944a-3p mature miRNA
• Sequence: 39 - UAUCACAGUAGUUGUACUUUAA - 60
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581