Stem-loop aae-mir-263a

Accession

MI0013495

Description

Aedes aegypti aae-mir-263a precursor miRNA

Literature search

3 open access papers mention aae-mir-263a
(9 sentences)

Sequence

204461 reads, 10483 reads per million, 2 experiments

uccuaguacacguAAUGGCACUGGAAGAAUUCACGGguauauuuugaaaucccCGUGUUCUGGCAGUGGCAUCCCugguacuaaggugauucaucag
.((((((((..(..(((.(((((..((((..((((((.((........)).))))))))))..))))).)))..)..))))).)))...........

Structure

----------u   -     ac uA   G     GA    UU      u  auu 
           ccu aguac  g  AUG CACUG  AGAA  CACGGg au   u
           ||| |||||  |  ||| |||||  ||||  |||||| ||    
           gga ucaug  C  UAC GUGAC  UCUU  GUGCcc ua   u
gacuacuuagu   a     gu CC   G     GG    --      c  aag 

Annotation confidence Medium

Genome context

supercont1.981: 164938-165034 [-]

Mature aae-miR-263a-5p

• Accession: MIMAT0014289
• Description: Aedes aegypti aae-miR-263a-5p mature miRNA
• Sequence: 14 - AAUGGCACUGGAAGAAUUCACGG - 36
• Evidence: experimental ; 454 [1]

Mature aae-miR-263a-3p

• Accession: MIMAT0015372
• Description: Aedes aegypti aae-miR-263a-3p mature miRNA
• Sequence: 54 - CGUGUUCUGGCAGUGGCAUCCC - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581


2. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119