miRBase entry: 20167119

Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus

PubMed ID 20167119
Authors Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
Journal BMC Genomics
Volume 11
Pages 119

There are 221 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
aae-mir-184 MI0013433 86688 ref|NW_001811236.1| 143366 143453 - High
aae-mir-275 MI0013434 35700 ref|NW_001810937.1| 486536 486618 + Medium
aae-mir-277 MI0013435 956 ref|NW_001810977.1| 508799 508893 + High
aae-mir-9c MI0013436 287 ref|NW_001811557.1| 186226 186308 + High
aae-mir-8 MI0013437 10753 ref|NW_001811143.1| 876043 876121 + High
aae-mir-252 MI0013438 2550 ref|NW_001811307.1| 1580021 1580091 - High
aae-bantam MI0013439 2493 ref|NW_001811229.1| 1579552 1579622 - High
aae-mir-71 MI0013440 8198 ref|NW_001810981.1| 889378 889454 - High
aae-mir-276-1 MI0013441 35626 ref|NW_001810178.1| 38970 39060 + High
aae-mir-317-1 MI0013442 18155 ref|NW_001810977.1| 429449 429540 + Medium
aae-mir-2a MI0013443 1891 ref|NW_001810981.1| 888581 888677 - High
aae-mir-998 MI0013444 691 ref|NW_001811512.1| 322280 322371 + High
aae-mir-92a MI0013445 625 ref|NW_001809979.1| 1267202 1267283 + High
aae-mir-306 MI0013446 110 ref|NW_001811557.1| 213059 213187 + High
aae-mir-281 MI0013447 1377 ref|NW_001811747.1| 134442 134538 + High
aae-mir-1889 MI0013448 141 ref|NW_001811440.1| 2720794 2720921 - High
aae-mir-980 MI0013449 74 ref|NW_001810912.1| 1043020 1043095 + High
aae-mir-278 MI0013450 124 ref|NW_001810458.1| 3596261 3596341 + High
aae-mir-989 MI0013451 10 ref|NW_001809968.1| 804160 804274 - High
aae-mir-14 MI0013452 1619 ref|NW_001810954.1| 1088962 1089134 - High
aae-mir-11 MI0013453 1495 ref|NW_001811512.1| 321996 322109 + High
aae-mir-190 MI0013454 4120 ref|NW_001810750.1| 82191 82291 - High
aae-mir-1 MI0013455 530586 ref|NW_001811588.1| 291326 291401 + High
aae-mir-34 MI0013456 45559 ref|NW_001810977.1| 509521 509649 + High
aae-mir-1890 MI0013457 167 ref|NW_001810805.1| 1733300 1733385 + High
aae-mir-957 MI0013458 2818 ref|NW_001811462.1| 464288 464365 + High
aae-mir-305 MI0013459 1831 ref|NW_001810937.1| 495587 495674 + High
aae-mir-996 MI0013460 6016 ref|NW_001811171.1| 567493 567590 - High
aae-mir-87 MI0013461 137 ref|NW_001811086.1| 1010781 1010887 + High
aae-mir-12 MI0013462 1123 ref|NW_001811440.1| 2720396 2720497 - High
aae-mir-13 MI0013463 756 ref|NW_001810981.1| 888736 888819 - High
aae-mir-999 MI0013464 1413 ref|NW_001809803.1| 2315100 2315178 + High
aae-mir-125 MI0013465 3408 ref|NW_001811163.1| 1156595 1156689 + High
aae-mir-308 MI0013466 730 ref|NW_001809879.1| 508970 509045 + High
aae-mir-315 MI0013467 1105 ref|NW_001811366.1| 104128 104219 + High
aae-mir-1891-1 MI0013468 1417 ref|NW_001811203.1| 72787 72873 + High
aae-mir-1891-2 MI0013469 1417 ref|NW_001811203.1| 72785 72876 + High
aae-mir-1175 MI0013470 4 ref|NW_001810078.1| 1648025 1648108 + Medium
aae-mir-1174 MI0013471 0 ref|NW_001810078.1| 1647825 1647942 + High
aae-mir-993 MI0013472 863 ref|NW_001809864.1| 256781 256881 + High
aae-mir-981 MI0013473 998 ref|NW_001810100.1| 638368 638458 - High
aae-mir-965 MI0013474 29 ref|NW_001811252.1| 2008650 2008728 + High
aae-mir-932 MI0013475 4908 ref|NW_001809873.1| 154098 154192 - High
aae-mir-927 MI0013476 1440 ref|NW_001810970.1| 2065412 2065487 + High
aae-mir-309a-1 MI0013477 0 ref|NW_001811355.1| 94024 94115 + High
aae-mir-309a-2 MI0013478 0 ref|NW_001811355.1| 94025 94115 + High
aae-mir-285 MI0013479 6085 ref|NW_001810912.1| 3339127 3339230 - High
aae-mir-137-1 MI0013480 586 ref|NW_001810211.1| 260664 260767 - High
aae-mir-137-2 MI0013481 586 ref|NW_001810211.1| 260667 260769 - High
aae-mir-133 MI0013482 179 ref|NW_001811549.1| 350289 350407 - High
aae-mir-31 MI0013483 1792 ref|NW_001811392.1| 483181 483329 - High
aae-mir-10 MI0013484 2248 ref|NW_001811175.1| 813543 813631 + High
aae-mir-iab-4-1 MI0013485 7 ref|NW_001811156.1| 763483 763556 - Medium
aae-mir-283 MI0013486 217 ref|NW_001811440.1| 2729329 2729431 - High
aae-mir-988 MI0013487 49 ref|NW_001811177.1| 623050 623124 - High
aae-mir-124 MI0013488 14774 ref|NW_001811351.1| 1664615 1664690 - High
aae-mir-2940 MI0013489 4022 ref|NW_001810888.1| 643957 644065 + High
aae-mir-2765 MI0013490 87 ref|NW_001809801.1| 5248294 5248380 + -
aae-mir-2941-1 MI0013491 2 ref|NW_001811113.1| 413127 413232 - High
aae-mir-2941-2 MI0013492 1 ref|NW_001811113.1| 413436 413530 - -
aae-mir-33 MI0013493 477 ref|NW_001811226.1| 351648 351727 + High
aae-mir-279 MI0013494 1911 ref|NW_001811171.1| 572245 572339 - High
aae-mir-263a MI0013495 10485 ref|NW_001811774.1| 164938 165034 - High
aae-mir-7 MI0013496 3173 ref|NW_001810199.1| 46026 46114 + High
aae-mir-100 MI0013497 2715 ref|NW_001811163.1| 1142154 1142279 + High
aae-mir-970 MI0013498 7915 ref|NW_001810909.1| 1045811 1045918 + High
aae-mir-210 MI0013499 6560 ref|NW_001811255.1| 515644 515711 - High
aae-mir-79 MI0013500 336 ref|NW_001811557.1| 213262 213357 + High
aae-mir-307 MI0013501 68 ref|NW_001810458.1| 1859419 1859509 - Medium
aae-mir-1000-1 MI0013502 294 ref|NW_001810696.1| 325456 325552 + Medium
aae-mir-1000-2 MI0013503 294 ref|NW_001835655.1| 170 266 - Medium
aae-mir-375 MI0013504 2 ref|NW_001811029.1| 1318735 1318850 - High
aae-mir-iab-4-2 MI0013531 7 ref|NW_001811472.1| 50256 50329 + Medium
cqu-mir-1174 MI0013561 None supercont3.86 865899 865962 + -
cqu-mir-125 MI0013562 None supercont3.4 280955 281049 + -
cqu-mir-iab-4 MI0013563 None supercont3.12 681147 681234 + -
cqu-mir-281-1 MI0013564 None supercont3.1661 13232 13338 + -
cqu-mir-124 MI0013565 None supercont3.8 2074723 2074800 + -
cqu-mir-1 MI0013566 None supercont3.78 246202 246278 + -
cqu-mir-988 MI0013567 None supercont3.791 14278 14363 + -
cqu-mir-275 MI0013568 None supercont3.291 329754 329854 + -
cqu-mir-315 MI0013569 None supercont3.438 61910 62002 + -
cqu-let-7 MI0013570 None supercont3.4 280595 280685 + -
cqu-mir-13 MI0013571 None supercont3.366 116988 117069 - -
cqu-mir-957 MI0013572 None supercont3.787 29533 29627 + -
cqu-mir-999 MI0013573 None supercont3.14 96862 96952 + -
cqu-mir-277 MI0013574 None supercont3.36 1153723 1153818 + -
cqu-mir-965 MI0013575 None supercont3.48 484120 484211 + -
cqu-mir-252-1 MI0013576 None supercont3.1787 6797 6867 - -
cqu-mir-993 MI0013577 None supercont3.12 55470 55568 + -
cqu-mir-278 MI0013578 None supercont3.16 1026146 1026250 + -
cqu-mir-970 MI0013579 None supercont3.495 35917 36003 + -
cqu-mir-283 MI0013580 None supercont3.57 559440 559549 + -
cqu-mir-9 MI0013581 None supercont3.83 64711 64821 + -
cqu-mir-305 MI0013582 None supercont3.291 339120 339207 + -
cqu-mir-317-1 MI0013583 None supercont3.36 1133155 1133246 + -
cqu-mir-981 MI0013584 None supercont3.431 151310 151408 + -
cqu-mir-100 MI0013585 None supercont3.4 271392 271501 + -
cqu-mir-989 MI0013586 None supercont3.315 321300 321401 + -
cqu-mir-1175 MI0013587 None supercont3.86 866094 866196 + -
cqu-mir-276-1 MI0013588 None supercont3.136 340846 340955 + -
cqu-mir-276-2 MI0013589 None supercont3.136 541130 541236 + -
cqu-mir-276-3 MI0013590 None supercont3.2457 865 974 + -
cqu-mir-12 MI0013591 None supercont3.57 562944 563041 + -
cqu-mir-210 MI0013592 None supercont3.549 157655 157722 - -
cqu-mir-263 MI0013593 None supercont3.219 351803 351878 - -
cqu-mir-92 MI0013594 None supercont3.722 174899 174986 - -
cqu-mir-71 MI0013596 None supercont3.366 117497 117578 - -
cqu-mir-190-2 MI0013597 None supercont3.351 105046 105135 - -
cqu-mir-190-1 MI0013598 None supercont3.181 347901 347990 - -
cqu-mir-1000 MI0013599 None supercont3.153 102798 102891 - -
cqu-mir-10 MI0013600 None supercont3.12 95988 96073 - -
cqu-mir-11 MI0013601 None supercont3.153 639666 639741 - -
cqu-mir-8 MI0013602 None supercont3.40 815858 815934 - -
cqu-mir-285 MI0013603 None supercont3.98 262290 262356 - -
cqu-mir-2 MI0013604 None supercont3.366 116852 116935 - -
cqu-mir-137 MI0013605 None supercont3.1714 27549 27639 - -
cqu-mir-932 MI0013606 None supercont3.261 301410 301474 - -
cqu-mir-14 MI0013607 None supercont3.676 52228 52328 - -
cqu-mir-279 MI0013608 None supercont3.19 1441120 1441192 - -
cqu-mir-996 MI0013609 None supercont3.19 1436999 1437091 - -
cqu-bantam MI0013610 None supercont3.65 199694 199763 - -
cqu-mir-1891 MI0013611 None supercont3.829 180333 180418 - -
cqu-mir-7 MI0013612 None supercont3.1 3357339 3357427 - -
cqu-mir-184 MI0013613 None supercont3.567 240300 240384 - -
cqu-mir-31 MI0013614 None supercont3.559 256524 256610 - -
cqu-mir-1890 MI0013615 None supercont3.64 982780 982856 - -
cqu-mir-980 MI0013617 None supercont3.263 352873 352948 + -
cqu-mir-308 MI0013618 None supercont3.98 764130 764200 + -
cqu-mir-79 MI0013619 None supercont3.83 80583 80657 + -
cqu-mir-33 MI0013620 None supercont3.1258 69328 69403 - -
cqu-mir-2951 MI0013621 None supercont3.1464 4408 4477 + -
cqu-mir-2941-1 MI0013622 None supercont3.5 753640 753706 - -
cqu-mir-2941-2 MI0013623 None supercont3.5 753788 753868 - -
cqu-mir-2952 MI0013624 None supercont3.5 753920 753983 - -
cqu-mir-133 MI0013625 None supercont3.1189 55672 55785 + -
cqu-mir-306 MI0013626 None supercont3.83 80431 80502 + -
cqu-mir-87 MI0013627 None supercont3.431 379740 379823 + -
cqu-mir-1889 MI0013628 None supercont3.57 562539 562677 + -
cqu-mir-316 MI0013629 None supercont3.496 152426 152564 - -
cqu-mir-375-1 MI0013630 None supercont3.4 25117 25222 - -
cqu-mir-309 MI0013631 None supercont3.145 66026 66116 - -
cqu-mir-998 MI0013632 None supercont3.153 639506 639609 - -
cqu-mir-252-2 MI0023546 None supercont3.975 115583 115653 + -
cqu-mir-281-2 MI0023547 None supercont3.640 99719 99825 + -
cqu-mir-317-2 MI0023548 None supercont3.36 1134821 1134912 + -
cqu-mir-375-2 MI0023549 None supercont3.455 42516 42621 + -
hsa-mir-33a MI0000091 793 chr22 41900944 41901012 + High
hsa-mir-92a-1 MI0000093 7474 chr13 91351314 91351391 + High
hsa-mir-92a-2 MI0000094 7101 chrX 134169538 134169612 - High
dme-mir-1 MI0000116 107366 chr2L 20487441 20487531 + High
dme-mir-8 MI0000128 57465 chr2R 16831432 16831518 + High
dme-mir-11 MI0000131 14078 chr3R 21622497 21622571 - High
hsa-mir-34a MI0000268 442 chr1 9151668 9151777 - High
hsa-mir-210 MI0000286 423 chr11 568089 568198 - High
dme-mir-184 MI0000354 120037 chr2R 13329402 13329501 - High
dme-mir-275 MI0000356 3405 chr2L 7425795 7425892 + High
dme-mir-92a MI0000357 7392 chr3R 25646506 25646600 + High
dme-mir-276a MI0000359 51649 chr3L 10365228 10365325 + High
dme-mir-277 MI0000360 22508 chr3R 10100022 10100121 + High
dme-mir-33 MI0000364 5938 chr3L 19797961 19798059 + High
dme-mir-281-1 MI0000366 2379 chr2R 12170373 12170462 - High
dme-mir-281-2 MI0000370 12674 chr2R 12170153 12170244 - High
dme-mir-34 MI0000371 32763 chr3R 10100936 10101034 + High
dme-mir-276b MI0000375 14614 chr3L 10319785 10319883 + High
dme-mir-210 MI0000376 2903 chrX 18128219 18128318 + High
dme-mir-92b MI0000379 7352 chr3R 25651398 25651497 + High
dme-bantam MI0000387 54356 chr3L 642208 642288 + High
dme-mir-309 MI0000421 2231 chr2R 19661706 19661774 - High
dme-mir-317 MI0000429 10951 chr3R 10091126 10091217 + High
hsa-mir-1-2 MI0000437 5211 chr18 21829004 21829088 - High
hsa-mir-184 MI0000481 1603 chr15 79209788 79209871 + High
hsa-mir-190a MI0000486 127 chr15 62823957 62824041 + High
hsa-mir-1-1 MI0000651 5442 chr20 62554306 62554376 + High
hsa-mir-34b MI0000742 437 chr11 111512938 111513021 + High
hsa-mir-34c MI0000743 1301 chr11 111513439 111513515 + High
aga-bantam MI0001599 None ref|NC_064601.1| 33021574 33021685 + High
aga-mir-1 MI0001601 None ref|NC_064602.1| 10484085 10484182 - High
aga-mir-184 MI0001609 None ref|NC_064602.1| 42298594 42298675 + High
aga-mir-210 MI0001610 None ref|NC_064600.1| 20690530 20690609 - High
aga-mir-275 MI0001613 None ref|NC_064602.1| 38099925 38100019 + High
aga-mir-276-1 MI0001614 None ref|NC_064601.1| 87872543 87872634 + High
aga-mir-277 MI0001615 None ref|NC_064601.1| 28080077 28080166 - High
aga-mir-281 MI0001618 None ref|NC_064601.1| 86247555 86247656 - High
aga-mir-317 MI0001627 None ref|NC_064601.1| 28097547 28097636 - High
aga-mir-8 MI0001630 None ref|NC_064602.1| 96156265 96156350 + High
aga-mir-92a MI0001632 None ref|NC_064601.1| 38578013 38578101 + High
aga-mir-92b MI0001633 None ref|NC_064601.1| 38592550 38592636 + High
hsa-mir-92b MI0003560 954 chr1 155195177 155195272 + High
hsa-mir-33b MI0003646 221 chr17 17813836 17813931 - High
hsa-mir-190b MI0005545 65 chr1 154193665 154193743 - -
dme-mir-190 MI0005808 1478 chr3L 8571799 8571898 + High
dme-mir-957 MI0005811 3995 chr3L 22518196 22518291 - High
dme-mir-970 MI0005827 1258 chrX 12636336 12636430 + High
dme-mir-980 MI0005837 640 chrX 280172 280269 - High
dme-mir-981 MI0005838 1912 chrX 1788861 1788957 - High
dme-mir-927 MI0005843 583 chrX 15965947 15966038 - High
dme-mir-989 MI0005848 15511 chr2R 14145351 14145524 - High
dme-mir-252 MI0005858 7388 chr3R 13464219 13464311 - High
dme-mir-1000 MI0005862 727 chr3R 25588859 25588958 - High
aga-mir-1174 MI0006237 None ref|NC_064601.1| 9041313 9041489 + High
aga-mir-1175 MI0006238 None ref|NC_064601.1| 9041591 9041670 + High
aga-mir-34 MI0006239 None ref|NC_064601.1| 28078221 28078310 - High
aga-mir-989 MI0006242 None ref|NC_064602.1| 58728183 58728313 + High
aga-mir-11 MI0008306 None ref|NC_064601.1| 12768528 12768617 + High
aga-mir-981 MI0008307 None ref|NC_064600.1| 1262446 1262540 + -
aga-mir-1889 MI0008309 None ref|NC_064601.1| 37380017 37380147 - High
aga-mir-1890 MI0008311 None ref|NC_064602.1| 20853697 20853792 - High
aga-mir-1891 MI0008312 None ref|NC_064602.1| 5810710 5810806 - High
aga-mir-190 MI0010594 None ref|NC_064601.1| 115514646 115514746 - -
aga-mir-927 MI0010596 None ref|NC_064600.1| 19053214 19053306 + -
aga-mir-970 MI0010599 None ref|NC_064600.1| 138059 138156 - -
aga-mir-957 MI0010600 None ref|NC_064602.1| 72792721 72792814 + -
aga-mir-1000 MI0010604 None ref|NC_064601.1| 12965517 12965609 + -
aga-mir-309 MI0010607 None ref|NC_064602.1| 42669950 42670023 - -
aga-mir-2944a-1 MI0033336 None ref|NC_064602.1| 42670118 42670173 - -
aga-mir-2944a-2 MI0033337 None ref|NC_064601.1| 67178094 67178150 - -
aga-mir-2944b MI0033339 None ref|NC_064602.1| 42670306 42670366 - Medium
aga-mir-2945 MI0033348 None ref|NC_064602.1| 10240546 10240611 - High
aga-mir-33 MI0033352 None ref|NC_064600.1| 1292200 1292264 - High
aga-mir-980 MI0033361 None ref|NC_064601.1| 21718628 21718685 - Medium



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