Stem-loop aga-mir-1000

Accession

MI0010604

Description

Anopheles gambiae aga-mir-1000 precursor miRNA

Literature search

2 open access papers mention aga-mir-1000
(12 sentences)

Sequence

1864 reads, 188.0 reads per million, 22 experiments

ccuagcagucgaugAUAUUGUCCUGUCACAGCAGUacuuuuugccuaguuuacuguuguuucgggacauuuccaucgacgcuaggguuuucau
((((((.(((((((..(.(((((((..(((((((((((........)))..))))))))..))))))).)..)))))))))))))........

Structure

--------      a       AU U       UC        --   uuu 
        ccuagc gucgaug  A UGUCCUG  ACAGCAGU  acu   u
        |||||| |||||||  | |||||||  ||||||||  |||    
        ggaucg cagcuac  u acagggc  uguuguca  uga   g
uacuuuug      -       cu u       uu        uu   ucc 

Annotation confidence Not enough data

Genome context

ref|NC_064601.1|: 12965517-12965609 [+]

Mature aga-miR-1000-5p

• Accession: MIMAT0010109
• Description: Anopheles gambiae aga-miR-1000-5p mature miRNA
• Sequence: 15 - AUAUUGUCCUGUCACAGCAGU - 35
• Evidence: not_experimental

References