Stem-loop cqu-mir-1174

Accession

MI0013561

Description

Culex quinquefasciatus cqu-mir-1174 precursor miRNA

Literature search

1 open access papers mention cqu-mir-1174
(7 sentences)

Sequence

uuCUGGGUAUUUUAGAUCAUCGGCauaguuuagagaaugcgacgauuucuuccguacccagagg
((((((((((...(((..((((((((..........))))..)))).)))...)))))))))).

Structure

-          UUU   UC    --    aguu 
 uuCUGGGUAU   AGA  AUCG  GCau    u
 ||||||||||   |||  ||||  ||||     
 gagacccaug   ucu  uagc  cgua    a
g          ccu   -u    ag    agag 

Annotation confidence Low

Genome context

supercont3.86: 865899-865962 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-1174

Mature cqu-miR-1174

• Accession: MIMAT0014354
• Description: Culex quinquefasciatus cqu-miR-1174 mature miRNA
• Sequence: 3 - CUGGGUAUUUUAGAUCAUCGGC - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119