miRBase entry: cqu-mir-125

Stem-loop cqu-mir-125

Accession

MI0013562

Description

Culex quinquefasciatus cqu-mir-125 precursor miRNA

Sequence

uuaguuuuguuucugcugauUCCCUGAGACCCUAACUUGUGAcuauaguugaaguuUCACAAGUUUUGAUCUCCGGUAUuagcggucgagauuca
..(((((((...((((((((..((.((((.(..(((((((((((........))..)))))))))..).)))).)).)))))))).)))))))..

Structure

uu       uuu        UC  U    C CU         --  aua 
  aguuuug   cugcugau  CC GAGA C  AACUUGUGA  cu   g
  |||||||   ||||||||  || |||| |  |||||||||  ||    
  uuagagc   ggcgauUA  GG CUCU G  UUGAACACU  ga   u
ac       --u        -U  C    A UU         uu  agu

Annotation confidence Not enough data

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Genome context

supercont3.4: 280955-281049 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-mir-125

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cqu-miR-125-5p

Accession	MIMAT0014355
Description	Culex quinquefasciatus cqu-miR-125-5p mature miRNA
Sequence	21 - UCCCUGAGACCCUAACUUGUGA - 42
Evidence	experimental Illumina [1]

Mature cqu-miR-125-3p

Accession	MIMAT0014356
Description	Culex quinquefasciatus cqu-miR-125-3p mature miRNA
Sequence	57 - UCACAAGUUUUGAUCUCCGGUAU - 79
Evidence	experimental Illumina [1]

References

PubMed ID: 20167119
Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
BMC Genomics (2010) 11:119