Stem-loop aga-mir-33

Accession

MI0033352

Description

Anopheles gambiae aga-mir-33 precursor miRNA

Literature search

5 open access papers mention aga-mir-33
(11 sentences)

Sequence

2777 reads, 149.0 reads per million, 24 experiments

GUGCAUUGUAGUUGCAUUGCAcuuaccguguuggcaacaggugCAGUACUUCUGCAAUGCAACCC
.((((((((((..(.(((((((((...((....))...))))))))).)..))))))))))....

Structure

---G          UU C         acc  g 
    UGCAUUGUAG  G AUUGCAcuu   gu u
    ||||||||||  | |||||||||   ||  
    ACGUAACGUC  C UGACgugga   cg u
CCCA          UU A         caa  g 

Annotation confidence High

Genome context

ref|NC_064600.1|: 1292200-1292264 [-]

Mature aga-miR-33-5p

• Accession: MIMAT0041523
• Description: Anopheles gambiae aga-miR-33-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature aga-miR-33-3p

• Accession: MIMAT0041524
• Description: Anopheles gambiae aga-miR-33-3p mature miRNA
• Sequence: 44 - CAGUACUUCUGCAAUGCAACCC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100