The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs |
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PubMed ID | 25766668 |
Authors | Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T |
Journal | BMC Genomics |
Volume | 16 |
Pages | 100 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
aga-mir-965-1 | MI0010602 | None | chr3R | 11096169 | 11096272 | + | - |
aga-mir-965-2 | MI0010603 | None | chr3R | 11101688 | 11101791 | + | - |
aga-mir-998 | MI0033334 | None | chr2R | 13042402 | 13042472 | + | - |
aga-mir-10355 | MI0033335 | None | chrX | 1723972 | 1724033 | + | - |
aga-mir-2944a-1 | MI0033336 | None | chr3R | 43008879 | 43008934 | - | - |
aga-mir-2944a-2 | MI0033337 | None | chr2L | 3537080 | 3537136 | - | - |
aga-mir-10361b | MI0033338 | None | chrX | 1722053 | 1722115 | + | - |
aga-mir-2944b | MI0033339 | None | chr3R | 43009067 | 43009127 | - | - |
aga-mir-10356-1 | MI0033340 | None | None | None | - | ||
aga-mir-10356-2 | MI0033341 | None | None | None | - | ||
aga-mir-10357 | MI0033342 | None | chrX | 24387661 | 24387740 | - | - |
aga-mir-10358-1 | MI0033343 | None | chr3L | 4968538 | 4968601 | + | - |
aga-mir-10358-2 | MI0033344 | None | chrX | 22590644 | 22590707 | - | - |
aga-mir-10358-3 | MI0033345 | None | chrX | 22709640 | 22709703 | + | - |
aga-mir-10358-4 | MI0033346 | None | None | None | - | ||
aga-mir-10358-5 | MI0033347 | None | chrX | 22368030 | 22368093 | - | - |
aga-mir-2945 | MI0033348 | None | chr3R | 10314332 | 10314397 | - | - |
aga-mir-10359 | MI0033349 | None | chrX | 20483864 | 20483955 | + | - |
aga-mir-285 | MI0033350 | None | chr3L | 39242666 | 39242729 | + | - |
aga-mir-10360 | MI0033351 | None | chr2R | 52133142 | 52133230 | - | - |
aga-mir-33 | MI0033352 | None | chrX | 1256014 | 1256078 | - | - |
aga-mir-10361a-1 | MI0033353 | None | chrX | 1722757 | 1722819 | + | - |
aga-mir-10361a-2 | MI0033354 | None | chrX | 1723464 | 1723526 | + | - |
aga-mir-10361a-3 | MI0033355 | None | chrX | 1724610 | 1724672 | + | - |
aga-mir-10362 | MI0033356 | None | chrX | 12989687 | 12989777 | - | - |
aga-mir-10363 | MI0033357 | None | chr2L | 2780435 | 2780514 | - | - |
aga-mir-10364 | MI0033358 | None | chrX | 6190756 | 6190807 | - | - |
aga-mir-2796 | MI0033359 | None | chr2R | 22427284 | 22427343 | + | - |
aga-mir-10365 | MI0033360 | None | chr3L | 17216221 | 17216288 | + | - |
aga-mir-980 | MI0033361 | None | chr2R | 21985899 | 21985956 | - | - |
aga-mir-10366a-1 | MI0033362 | None | chrX | 15153636 | 15153695 | - | - |
aga-mir-10367 | MI0033363 | None | chr2R | 34624575 | 34624634 | - | - |
aga-mir-10366b | MI0033364 | None | chrX | 15128214 | 15128270 | - | - |
aga-mir-932 | MI0033365 | None | chr2R | 15199832 | 15199898 | + | - |
aga-mir-10366a-2 | MI0033366 | None | chrX | 15180793 | 15180853 | - | - |
aga-mir-10368 | MI0033367 | None | chrX | 7416770 | 7416834 | - | - |
aga-mir-10369 | MI0033368 | None | chrX | 15179879 | 15179934 | - | - |
aga-mir-10370-1 | MI0033369 | None | chrX | 15180515 | 15180578 | - | - |
aga-mir-10370-2 | MI0033370 | None | chrX | 15153352 | 15153415 | - | - |
aga-mir-10371 | MI0033371 | None | chr3L | 4060794 | 4060873 | + | - |
aga-mir-10372a | MI0033372 | None | chrX | 15152858 | 15152916 | - | - |
aga-mir-10373 | MI0033373 | None | chr3L | 4587583 | 4587658 | + | - |
aga-mir-10372b | MI0033374 | None | chrX | 15179292 | 15179349 | - | - |
aga-mir-10374 | MI0033375 | None | chr2L | 18098737 | 18098795 | + | - |
aga-mir-2b | MI0033376 | None | chr2L | 37757412 | 37757490 | - | - |
aga-mir-286b | MI0033377 | None | chr2L | 3537482 | 3537547 | - | - |
aga-mir-31 | MI0033378 | None | chrX | 14375923 | 14375980 | + | - |
aga-mir-10375a | MI0033379 | None | chrX | 1722335 | 1722398 | + | - |
aga-mir-10375b-1 | MI0033380 | None | chrX | 1722550 | 1722613 | + | - |
aga-mir-10375b-2 | MI0033381 | None | chrX | 1723257 | 1723320 | + | - |
aga-mir-10375b-3 | MI0033382 | None | chrX | 1724403 | 1724466 | + | - |
aga-mir-10376 | MI0033383 | None | chr2R | 2995184 | 2995258 | + | - |
aga-mir-10377a | MI0033384 | None | chr3R | 19372881 | 19372972 | - | - |
aga-mir-2c | MI0033385 | None | chr2L | 37758085 | 37758193 | - | - |
aga-mir-10377b | MI0033386 | None | chr3R | 19372525 | 19372629 | - | - |
aga-mir-10378 | MI0033387 | None | chr2R | 18852626 | 18852723 | - | - |
aga-mir-10379 | MI0033388 | None | chrX | 7417600 | 7417679 | - | - |
aga-mir-10380 | MI0033389 | None | chrX | 23965282 | 23965364 | + | - |
aga-mir-10381 | MI0033390 | None | chr3R | 42055853 | 42055956 | + | - |
dme-mir-263a | MI0000343 | 4635 | chr2L | 11953410 | 11953503 | - | - |
dme-mir-219 | MI0000358 | 256 | chr3L | 17315006 | 17315105 | + | High |
dme-mir-133 | MI0000362 | 1370 | chr2L | 20616617 | 20616714 | + | High |
dme-bantam | MI0000387 | 54356 | chr3L | 642208 | 642288 | + | High |
aga-bantam | MI0001599 | None | chr2R | 33274498 | 33274608 | + | - |
aga-mir-133 | MI0001606 | None | chr3R | 15075209 | 15075294 | - | - |
aga-mir-219 | MI0001611 | None | chr2L | 21839672 | 21839758 | - | - |
aga-mir-263a | MI0001612 | None | chr3R | 12395476 | 12395561 | + | - |
dme-mir-989 | MI0005848 | 15511 | chr2R | 14145351 | 14145524 | - | High |
dme-mir-929 | MI0005853 | 188 | chr3R | 4295369 | 4295456 | + | High |
aga-mir-989 | MI0006242 | None | chr3L | 2905395 | 2905525 | + | - |
aga-mir-929 | MI0010595 | None | chr2R | 38819434 | 38819522 | - | - |