miRBase entry: aga-mir-10355

Stem-loop aga-mir-10355

Accession

MI0033335

Description

Anopheles gambiae aga-mir-10355 precursor miRNA

Sequence

CAUUACCGAUGGAUCCUUACCGauguauuugguacuauucAGUAAGGGUUUUCUGUAAUGCA
((((((.((.((((((((((.((.((((...))))...)).)))))))))))).))))))..

Structure

--      C  U          C  --u    u 
  CAUUAC GA GGAUCCUUAC Ga   guau  
  |||||| || |||||||||| ||   |||| u
  GUAAUG CU UUUGGGAAUG cu   caug  
AC      U  -          A  uau    g

Annotation confidence Not enough data

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Genome context

chrX: 1723972-1724033 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from aga-mir-10355

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aga-miR-10355-5p

Accession	MIMAT0041501
Description	Anopheles gambiae aga-miR-10355-5p mature miRNA
Sequence	1 - CAUUACCGAUGGAUCCUUACCG - 22
Evidence	experimental Illumina [1]

Mature aga-miR-10355-3p

Accession	MIMAT0041502
Description	Anopheles gambiae aga-miR-10355-3p mature miRNA
Sequence	41 - AGUAAGGGUUUUCUGUAAUGCA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25766668
The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
BMC Genomics (2015) 16:100