Stem-loop aga-mir-10377b

Accession

MI0033386

Description

Anopheles gambiae aga-mir-10377b precursor miRNA

Literature search

1 open access papers mention aga-mir-10377b
(1 sentences)

Sequence

auaguuGGAGUUGGAAAUUGACGUAACCaauaugcaagcgaucugucacaagagcgauuugauggcgaaucuaaugagUCAUCAUCAGUUUCUAAUUCCAucuau
((((.((((((((((((((((((((.....))))....((.(((......))).))...(((((((...........))))))))))))))))))))))).))))

Structure

    u                --------------------------------------------------    A 
auag uGGAGUUGGAAAUUGA                                                  CGUA C
|||| ||||||||||||||||                                                  |||| C
uauc ACCUUAAUCUUUGACU                                                  guau a
    u                ACUACUgaguaaucuaagcgguaguuuagcgagaacacugucuagcgaac    a 

Annotation confidence Low

Genome context

chr3R: 19372525-19372629 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-10377b

Mature aga-miR-10377b-5p

• Accession: MIMAT0041580
• Description: Anopheles gambiae aga-miR-10377b-5p mature miRNA
• Sequence: 7 - GGAGUUGGAAAUUGACGUAACC - 28
• Evidence: experimental ; Illumina [1]

Mature aga-miR-10377b-3p

• Accession: MIMAT0041581
• Description: Anopheles gambiae aga-miR-10377b-3p mature miRNA
• Sequence: 79 - UCAUCAUCAGUUUCUAAUUCCA - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100