Stem-loop aga-mir-31

Accession

MI0033378

Description

Anopheles gambiae aga-mir-31 precursor miRNA

Literature search

3 open access papers mention aga-mir-31
(4 sentences)

Sequence

UGGCAAGAUGUUGGCAUAGCUAaaagauuuggauuUAGCUAUUCAACUUCUUGUUUAU
.(((((((.(((((.(((((((((.........)))))))))))))).)))))))...

Structure

--U       U     C         aga 
   GGCAAGA GUUGG AUAGCUAaa   u
   ||||||| ||||| |||||||||   u
   UUGUUCU CAACU UAUCGAUuu   u
UAU       U     -         agg 

Annotation confidence Not enough data

Genome context

chrX: 14375923-14375980 [+]

Mature aga-miR-31-5p

• Accession: MIMAT0041568
• Description: Anopheles gambiae aga-miR-31-5p mature miRNA
• Sequence: 1 - UGGCAAGAUGUUGGCAUAGCUA - 22
• Evidence: experimental ; Illumina [1]

Mature aga-miR-31-3p

• Accession: MIMAT0041569
• Description: Anopheles gambiae aga-miR-31-3p mature miRNA
• Sequence: 36 - UAGCUAUUCAACUUCUUGUUUAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100