Stem-loop aga-bantam

Accession

MI0001599

Description

Anopheles gambiae aga-bantam precursor miRNA

Literature search

8 open access papers mention aga-bantam
(19 sentences)

Sequence

1491763 reads, 62260.0 reads per million, 24 experiments

uguguggaugaaauguaaucacagaaCCGGUUUUCAUUUUCGAUCUGACUuauuuuuuucacaaacaagUGAGAUCACUUUGAAAGCUGAUUuuguacaauuaauucaacg
.((.(((((....(((....((((((.(((((((((.....(((((.((((.(((.......))).)))).)))))....))))))))).)))))))))....))))))).

Structure

u  g     gaaa   aauc      C         UUUUC     G    a   uu 
 gu uggau    ugu    acagaa CGGUUUUCA     GAUCU ACUu uuu  u
 || |||||    |||    |||||| |||||||||     ||||| |||| |||  u
 ca acuua    aca    uguuUU GUCGAAAGU     CUAGA Ugaa aaa  c
g  -     auua   ----      A         -UUCA     G    c   ca 

Annotation confidence High

Genome context

ref|NC_064601.1|: 33021574-33021685 [+]

Mature aga-bantam-5p

• Accession: MIMAT0052989
• Description: Anopheles gambiae aga-bantam-5p mature miRNA
• Sequence: 27 - CCGGUUUUCAUUUUCGAUCUGACU - 50
• Evidence: not_experimental

Mature aga-bantam-3p

• Accession: MIMAT0001494
• Description: Anopheles gambiae aga-bantam-3p mature miRNA
• Sequence: 70 - UGAGAUCACUUUGAAAGCUGAUU - 92
• Evidence: not_experimental

References