Stem-loop aga-mir-10380

Accession

MI0033389

Description

Anopheles gambiae aga-mir-10380 precursor miRNA

Sequence

GUGAGUAAUGUGUUGCUGAAUGUUUGAuuguucuugcacugcuauucuugcugcuuuucAAUUCUCAACCUCACAUUACAGAg
....((((((((..(.(((......(((((.....(((..((.......)))))....))))).))).)..))))))))....

Structure

GUGA        UU C   AUGUUU     uucuu   cu  ua 
    GUAAUGUG  G UGA      GAuug     gca  gc  u
    ||||||||  | |||      |||||     |||  ||  u
    CAUUACAC  C ACU      UUAAc     cgu  cg  c
gAGA        UC A   -----C     -uuuu   --  uu 

Annotation confidence Low

Genome context

chrX: 23965282-23965364 [+]

Mature aga-miR-10380-5p

• Accession: MIMAT0041586
• Description: Anopheles gambiae aga-miR-10380-5p mature miRNA
• Sequence: 1 - GUGAGUAAUGUGUUGCUGAAUGUUUGA - 27
• Evidence: experimental ; Illumina [1]

Mature aga-miR-10380-3p

• Accession: MIMAT0041587
• Description: Anopheles gambiae aga-miR-10380-3p mature miRNA
• Sequence: 60 - AAUUCUCAACCUCACAUUACAGA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100