Stem-loop aga-mir-2944a-1

Accession

MI0033336

Description

Anopheles gambiae aga-mir-2944a-1 precursor miRNA

Literature search

3 open access papers mention aga-mir-2944a-1
(17 sentences)

Sequence

GAAGGAACUUCUGCUGUGAUCUgaguuaggaucaUAUCACAGUAGUUGUACUUUAA
.((((.((..((((((((((.(((.......))).))))))))))..)).))))..

Structure

-G    A  UU          C   gu 
  AAGG AC  CUGCUGUGAU Uga  u
  |||| ||  |||||||||| |||  a
  UUUC UG  GAUGACACUA acu  g
AA    A  UU          U   ag 

Annotation confidence Low

Genome context

chr3R: 43008879-43008934 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from aga-mir-2944a-1

Mature aga-miR-2944a-5p

• Accession: MIMAT0041503
• Description: Anopheles gambiae aga-miR-2944a-5p mature miRNA
• Sequence: 1 - GAAGGAACUUCUGCUGUGAUCU - 22
• Evidence: experimental ; Illumina [1]

Mature aga-miR-2944a-3p

• Accession: MIMAT0041504
• Description: Anopheles gambiae aga-miR-2944a-3p mature miRNA
• Sequence: 35 - UAUCACAGUAGUUGUACUUUAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100