Stem-loop aga-mir-10379

Accession

MI0033388

Description

Anopheles gambiae aga-mir-10379 precursor miRNA

Sequence

ucaaugacgccaACUGUUUUGUUCGUUGUUCUCAcauauuucguuugUGGAAGAACGAACAAGACUGUAgaugucauuga
(((((((((.(.((.((((((((((((.(((.((((.........))))))).)))))))))))).)).).)))))))))

Structure

         c a  U            G   U    uau 
ucaaugacg c AC GUUUUGUUCGUU UUC CAca   u
||||||||| | || |||||||||||| ||| ||||   u
aguuacugu g UG CAGAACAAGCAA AAG GUgu   c
         a A  U            G   -    uug 

Annotation confidence Low

Genome context

chrX: 7417600-7417679 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-10379

Mature aga-miR-10379-5p

• Accession: MIMAT0041584
• Description: Anopheles gambiae aga-miR-10379-5p mature miRNA
• Sequence: 13 - ACUGUUUUGUUCGUUGUUCUCA - 34
• Evidence: experimental ; Illumina [1]

Mature aga-miR-10379-3p

• Accession: MIMAT0041585
• Description: Anopheles gambiae aga-miR-10379-3p mature miRNA
• Sequence: 48 - UGGAAGAACGAACAAGACUGUA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100