miRBase entry: aga-mir-10379

Stem-loop aga-mir-10379

Accession

MI0033388

Description

Anopheles gambiae aga-mir-10379 precursor miRNA

Sequence

ucaaugacgccaACUGUUUUGUUCGUUGUUCUCAcauauuucguuugUGGAAGAACGAACAAGACUGUAgaugucauuga
(((((((((.(.((.((((((((((((.(((.((((.........))))))).)))))))))))).)).).)))))))))

Structure

         c a  U            G   U    uau 
ucaaugacg c AC GUUUUGUUCGUU UUC CAca   u
||||||||| | || |||||||||||| ||| ||||   u
aguuacugu g UG CAGAACAAGCAA AAG GUgu   c
         a A  U            G   -    uug

Annotation confidence Not enough data

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Genome context

chrX: 7417600-7417679 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-10379

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aga-miR-10379-5p

Accession	MIMAT0041584
Description	Anopheles gambiae aga-miR-10379-5p mature miRNA
Sequence	13 - ACUGUUUUGUUCGUUGUUCUCA - 34
Evidence	experimental Illumina [1]

Mature aga-miR-10379-3p

Accession	MIMAT0041585
Description	Anopheles gambiae aga-miR-10379-3p mature miRNA
Sequence	48 - UGGAAGAACGAACAAGACUGUA - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 25766668
The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
BMC Genomics (2015) 16:100