Stem-loop aga-mir-10381

Accession

MI0033390

Description

Anopheles gambiae aga-mir-10381 precursor miRNA

Sequence

GUGAGUAAACGCGCAAAGCGGAaguaggcagugcgggaugugaugucacccacgggaaugacggugcacauuugcuuauccgcuuuauguuuuuacuuuuagcu
..(((((((.(((.((((((((..((((((......((((((.(((((((....))..)))))...)))))))))))))))))))).))).)))))))......

Structure

----GU       C   C        ag      gugcgg      --a     --  c 
      GAGUAAA GCG AAAGCGGA  uaggca      gaugug   uguca  cc a
      ||||||| ||| ||||||||  ||||||      ||||||   |||||  ||  
      uucauuu ugu uuucgccu  auucgu      uuacac   gcagu  gg c
ucgauu       u   a        --      ------      gug     aa  g 

Annotation confidence Not enough data

Genome context

chr3R: 42055853-42055956 [+]

Mature aga-miR-10381-5p

• Accession: MIMAT0041588
• Description: Anopheles gambiae aga-miR-10381-5p mature miRNA
• Sequence: 1 - GUGAGUAAACGCGCAAAGCGGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100