Stem-loop aga-mir-10377a

Accession

MI0033384

Description

Anopheles gambiae aga-mir-10377a precursor miRNA

Sequence

uGGAGUUGGAGAGUGGCUUAACcagcaaguuugcggucugccaaaagagcugugugguggugagucccgggUAAAGCCAUUCCUCAAUUCUA
(((((((((.(((((((((.(((.(((....)))((.((((((..(.(....).)..)))).)).))..))).))))))))).)))))))))

Structure

         A         A   agcaaguuugc  u  -    aa g g 
uGGAGUUGG GAGUGGCUU ACc           gg cu gcca  a a c
||||||||| ||||||||| |||           || || ||||  | |  
AUCUUAACU CUUACCGAA Ugg           cc ga uggu  u u u
         C         A   ---------gc  u  g    gg g g 

Annotation confidence Low

Genome context

chr3R: 19372881-19372972 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-10377a

Mature aga-miR-10377a-5p

• Accession: MIMAT0041576
• Description: Anopheles gambiae aga-miR-10377a-5p mature miRNA
• Sequence: 2 - GGAGUUGGAGAGUGGCUUAAC - 22
• Evidence: experimental ; Illumina [1]

Mature aga-miR-10377a-3p

• Accession: MIMAT0041577
• Description: Anopheles gambiae aga-miR-10377a-3p mature miRNA
• Sequence: 72 - UAAAGCCAUUCCUCAAUUCUA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100