Stem-loop aga-mir-989

Accession

MI0006242

Description

Anopheles gambiae aga-mir-989 precursor miRNA

Literature search

10 open access papers mention aga-mir-989
(82 sentences)

Sequence

190738 reads, 36367.0 reads per million, 24 experiments

ggacaguacaguggccacggggguaCGCCGCUACGUUGCUUUCACUUGguacgcucguauaguauagagcuaaaaguaaacauagauccaUGUGAUGUGACGUAGUGGUACccucccgugucuaucacaac
..........((((.((((((((...(((((((((((((..((((.(((...((((..........)))).................))).)))).)))))))))))))...)))))))).))))......

Structure

ggacaguaca    c        uaC             UU    U   --------------uac    guau 
          gugg cacggggg   GCCGCUACGUUGC  UCAC UGg                 gcuc    a
          |||| ||||||||   |||||||||||||  |||| |||                 ||||     
          uauc gugcccuc   UGGUGAUGCAGUG  AGUG acc                 cgag    g
----caacac    u        cCA             -U    U   uagauacaaaugaaaau    auau 

Annotation confidence High

Genome context

ref|NC_064602.1|: 58728183-58728313 [+]

Mature aga-miR-989-5p

• Accession: MIMAT0053029
• Description: Anopheles gambiae aga-miR-989-5p mature miRNA
• Sequence: 26 - CGCCGCUACGUUGCUUUCACUUG - 48
• Evidence: experimental ; cloned [1]

Mature aga-miR-989-3p

• Accession: MIMAT0005529
• Description: Anopheles gambiae aga-miR-989-3p mature miRNA
• Sequence: 91 - UGUGAUGUGACGUAGUGGUAC - 111
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17933784
   Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
   "Winter F, Edaye S, Huttenhofer A, Brunel C"
   "Nucleic Acids Res (2007) 35:6953-6962