Stem-loop aga-mir-286b

Accession

MI0033377

Description

Anopheles gambiae aga-mir-286b precursor miRNA

Literature search

2 open access papers mention aga-mir-286b
(2 sentences)

Sequence

GCGAAUGUCGGAGUAGUCGCUugugauugaauugacaaaaagUGACUAGACCGAACACUCGUAUCC
((((.((((((..(((((((((((.(......).)))...))))))))..))).))).))))....

Structure

----    A   -   AG        ---   g uu 
    GCGA UGU CGG  UAGUCGCU   ugu a  g
    |||| ||| |||  ||||||||   ||| |   
    UGCU ACA GCC  AUCAGUga   aca u  a
CCUA    C   A   AG        aaa   g ua 

Annotation confidence Low

Genome context

chr2L: 3537482-3537547 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-286b

Mature aga-miR-286b-5p

• Accession: MIMAT0041566
• Description: Anopheles gambiae aga-miR-286b-5p mature miRNA
• Sequence: 1 - GCGAAUGUCGGAGUAGUCGCU - 21
• Evidence: experimental ; Illumina [1]

Mature aga-miR-286b-3p

• Accession: MIMAT0041567
• Description: Anopheles gambiae aga-miR-286b-3p mature miRNA
• Sequence: 43 - UGACUAGACCGAACACUCGUAUCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100