Stem-loop aga-mir-2944b

Accession

MI0033339

Description

Anopheles gambiae aga-mir-2944b precursor miRNA

Literature search

5 open access papers mention aga-mir-2944b
(17 sentences)

Sequence

GAAGGAACUCCCGGUGUGAUAUGuuggaaaauccguaccaUAUCACAGCGGUAGUUACCUG
..(((((((.(((.(((((((((.((((...))))...))))))))).))).)))).))).

Structure

GA   -    C   G         --u    a 
  AGG AACU CCG UGUGAUAUG   ugga  
  ||| |||| ||| |||||||||   |||| a
  UCC UUGA GGC ACACUAUac   gccu  
-G   A    U   G         cau    a 

Annotation confidence Not enough data

Genome context

chr3R: 43009067-43009127 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from aga-mir-2944b

Mature aga-miR-2944b-5p

• Accession: MIMAT0041507
• Description: Anopheles gambiae aga-miR-2944b-5p mature miRNA
• Sequence: 1 - GAAGGAACUCCCGGUGUGAUAUG - 23
• Evidence: experimental ; Illumina [1]

Mature aga-miR-2944b-3p

• Accession: MIMAT0041508
• Description: Anopheles gambiae aga-miR-2944b-3p mature miRNA
• Sequence: 41 - UAUCACAGCGGUAGUUACCUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100