Stem-loop aga-mir-2b

Accession

MI0033376

Description

Anopheles gambiae aga-mir-2b precursor miRNA

Literature search

3 open access papers mention aga-mir-2b
(17 sentences)

Sequence

UCUCAAAGUGGCUGUGAAAUGcguccuucacuguguaagggaagauuccuuuuucgcaUAUCACAGCCAGCUUUGAAGA
..(((((((((((((((.(((((.............((((((....))))))..))))).))))))))).))))))...

Structure

-UC      -         A     uccuucacugugu      a 
   UCAAAG UGGCUGUGA AUGcg             aaggga g
   |||||| ||||||||| |||||             ||||||  
   AGUUUC ACCGACACU Uacgc             uuuccu a
AGA      G         A     -----------uu      u 

Annotation confidence Low

Genome context

chr2L: 37757412-37757490 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from aga-mir-2b

Mature aga-miR-2b-5p

• Accession: MIMAT0041564
• Description: Anopheles gambiae aga-miR-2b-5p mature miRNA
• Sequence: 1 - UCUCAAAGUGGCUGUGAAAUG - 21
• Evidence: experimental ; Illumina [1]

Mature aga-miR-2b-3p

• Accession: MIMAT0041565
• Description: Anopheles gambiae aga-miR-2b-3p mature miRNA
• Sequence: 59 - UAUCACAGCCAGCUUUGAAGA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100