Stem-loop cqu-mir-1

Accession

MI0013566

Description

Culex quinquefasciatus cqu-mir-1 precursor miRNA

Literature search

3 open access papers mention cqu-mir-1
(6 sentences)

Sequence

gcgaaaguuccaugcuuccuugcauucaauagugaucuuugaaacguaUGGAAUGUAAAGAAGUAUGGAGcgcucgg
.(((..((((((((((((.((((((((.(((((..........)).))).)))))))).))))))))))))..))).

Structure

g   aa            c        a   -  gauc 
 cga  guuccaugcuuc uugcauuc aua gu    u
 |||  |||||||||||| |||||||| ||| ||     
 gcu  cGAGGUAUGAAG AAUGUAAG Uau ca    u
g   cg            A        G   g  aagu 

Annotation confidence Low

Genome context

supercont3.78: 246202-246278 [+]

Mature cqu-miR-1

• Accession: MIMAT0014361
• Description: Culex quinquefasciatus cqu-miR-1 mature miRNA
• Sequence: 49 - UGGAAUGUAAAGAAGUAUGGAG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119