Stem-loop cqu-mir-993

Accession

MI0013577

Description

Culex quinquefasciatus cqu-mir-993 precursor miRNA

Sequence

agcgcuccuccgugaccUACCCUGUAGUUCCGGGCUUUUgugguuaacaaaaauauauuaucaGAAGCUCGUUUCUAUAGAGGuaucucacagggugaa
..(((.(((..((((..((((((((((...((((((((((((((............)))).))))))))))...)))))).))))..))))))))))..

Structure

ag   u   cc    cc    -      UUC          -    uaaca 
  cgc ccu  guga  UACC CUGUAG   CGGGCUUUUg uggu     a
  ||| |||  ||||  |||| ||||||   |||||||||| ||||      
  gug gga  cacu  auGG GAUAUC   GCUCGAAGac auua     a
aa   -   --    cu    A      UUU          u    uauaa 

Annotation confidence Not enough data

Genome context

supercont3.12: 55470-55568 [+]

Mature cqu-miR-993-5p

• Accession: MIMAT0014375
• Description: Culex quinquefasciatus cqu-miR-993-5p mature miRNA
• Sequence: 18 - UACCCUGUAGUUCCGGGCUUUU - 39
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-993-3p

• Accession: MIMAT0014376
• Description: Culex quinquefasciatus cqu-miR-993-3p mature miRNA
• Sequence: 64 - GAAGCUCGUUUCUAUAGAGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119