Stem-loop cqu-mir-965

Accession

MI0013575

Description

Culex quinquefasciatus cqu-mir-965 precursor miRNA

Sequence

cuggcagauucugaagggggaaauccugugcgcucuauguugcauuuuaucgacccaUAAGCGUAUAGCUUUUCCCAUUcagcgugugccca
..((((.((.(((((..((((((..(((((((((.((((...(........)...)))))))))))))..)))))).))))).)).))))..

Structure

cu    g  u     gg      uc         c    uug auu 
  ggca au cugaa  gggaaa  cugugcgcu uaug   c   u
  |||| || |||||  ||||||  ||||||||| ||||   |    
  ccgu ug gacUU  CCCUUU  GAUAUGCGA AUac   g   u
ac    g  c     -A      UC         -    cca cua 

Annotation confidence Low

Genome context

supercont3.48: 484120-484211 [+]

Mature cqu-miR-965

• Accession: MIMAT0014372
• Description: Culex quinquefasciatus cqu-miR-965 mature miRNA
• Sequence: 58 - UAAGCGUAUAGCUUUUCCCAUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119