Stem-loop cqu-mir-316

Accession

MI0013629

Description

Culex quinquefasciatus cqu-mir-316 precursor miRNA

Sequence

uucaccaaccuggaacgaaccccuuuugauugauuUGUCUUUUUCCGCUUACUGCCGgugguguucgaaagucccgacagcaaacagaaaaaggcgccucaaucaauuacagaacgccgucaaauuagugccccaagaa
..(((.((..(((..((........((((((((..((((((((((.(.((.(((.(((.(((........)))))).))).)).).))))))))))..))))))))........))...)))..)).))).........

Structure

-------uu   c  cc   -aa  aaccccuu        uu          C C  A   C   u   guu 
         cac aa  ugg   cg        uugauuga  UGUCUUUUUC G UU CUG CGg ggu   c
         ||| ||  |||   ||        ||||||||  |||||||||| | || ||| ||| |||    
         gug uu  acu   gc        aacuaacu  gcggaaaaag c aa gac gcc cug   g
aagaacccc   a  aa   gcc  aagacauu        cc          a a  c   a   -   aaa 

Annotation confidence Not enough data

Genome context

supercont3.496: 152426-152564 [-]

Mature cqu-miR-316

• Accession: MIMAT0014442
• Description: Culex quinquefasciatus cqu-miR-316 mature miRNA
• Sequence: 36 - UGUCUUUUUCCGCUUACUGCCG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119