Stem-loop cqu-mir-79

Accession

MI0013619

Description

Culex quinquefasciatus cqu-mir-79 precursor miRNA

Sequence

ucguccauGCUUUGGCGCUUUAGCUGUAUGAuagaauuuaauauuucauaaagcuagauuaccaaagcauggaag
...((((((((((((...(((((((.(((((..............))))).)))))))...))))))))))))..

Structure

ucg            CGC       G     uagaau 
   uccauGCUUUGG   UUUAGCU UAUGA      u
   ||||||||||||   ||||||| |||||       
   agguacgaaacc   agaucga auacu      u
-ga            auu       a     uuauaa 

Annotation confidence Not enough data

Genome context

supercont3.83: 80583-80657 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-79

Mature cqu-miR-79

• Accession: MIMAT0014430
• Description: Culex quinquefasciatus cqu-miR-79 mature miRNA
• Sequence: 9 - GCUUUGGCGCUUUAGCUGUAUGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119