Stem-loop cqu-mir-87

Accession

MI0013627

Description

Culex quinquefasciatus cqu-mir-87 precursor miRNA

Sequence

aagauugucucuggccagccugaaguuugcuaaaccugguucgucaagGUGAGCAAAUUUUCAGGUGUGUcggagaacaaucac
..(((((((((((((..((((((((((((((..((((.........)))).)))))).))))))))..))))))).))))))..

Structure

aa      -       ca        -      aa    ggu 
  gauugu cucuggc  gccugaag uuugcu  accu   u
  |||||| |||||||  |||||||| ||||||  ||||   c
  cuaaca gaggcUG  UGGACUUU AAACGA  UGga   g
ca      a       UG        U      -G    acu 

Annotation confidence Low

Genome context

supercont3.431: 379740-379823 [+]

Mature cqu-miR-87

• Accession: MIMAT0014439
• Description: Culex quinquefasciatus cqu-miR-87 mature miRNA
• Sequence: 49 - GUGAGCAAAUUUUCAGGUGUGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119