Stem-loop aga-mir-1891

Accession

MI0008312

Description

Anopheles gambiae aga-mir-1891 precursor miRNA

Literature search

3 open access papers mention aga-mir-1891
(5 sentences)

Sequence

25798 reads, 2226.0 reads per million, 24 experiments

gccuccucuuuuuccgucauguUGAGGAGUUAAUUUGCGUGUUUUuauauuugauuaaACACGUCCAUUAACUCUGGUACaugaugguaaaagcgagcaac
((.((..(((((.(((((((((...(((((((((..((((((((............))))))))..)))))))))...))))))))).))))).))))...

Structure

---  c  cu     u         UGA         UU        Uuaua 
   gc uc  cuuuu ccgucaugu   GGAGUUAAU  GCGUGUUU     u
   || ||  ||||| |||||||||   |||||||||  ||||||||      
   cg ag  gaaaa gguaguaCA   UCUCAAUUA  UGCACAaa     u
caa  -  -c     u         UGG         CC        uuagu 

Annotation confidence High

Comments

This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context

ref|NC_064602.1|: 5810710-5810806 [-]

Mature aga-miR-1891-5p

• Accession: MIMAT0007862
• Description: Anopheles gambiae aga-miR-1891-5p mature miRNA
• Sequence: 23 - UGAGGAGUUAAUUUGCGUGUUUU - 45
• Evidence: not_experimental

Mature aga-miR-1891-3p

• Accession: MIMAT0053035
• Description: Anopheles gambiae aga-miR-1891-3p mature miRNA
• Sequence: 59 - ACACGUCCAUUAACUCUGGUAC - 80
• Evidence: not_experimental

References

1. PubMed ID: 18500992
   Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
   Mead EA, Tu Z
   BMC Genomics (2008) 9:244