Stem-loop cqu-mir-2

Accession

MI0013604

Description

Culex quinquefasciatus cqu-mir-2 precursor miRNA

Sequence

aacuguauccacucucaaaguggcugugaaaugguuccuccagaaaucgccaUAUCACAGCCAGCUUUGAAGAGCgauacgguu
(((((((((..((((((((((((((((((.(((((.............))))).))))))))).))))).)))).)))))))))

Structure

         ca    -     -         a     uccuc 
aacuguauc  cucu caaag uggcuguga auggu     c
|||||||||  |||| ||||| ||||||||| |||||     a
uuggcauag  GAGA GUUUC ACCGACACU Uaccg     g
         -C    A     G         A     cuaaa 

Annotation confidence Not enough data

Genome context

supercont3.366: 116852-116935 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-mir-2

Mature cqu-miR-2

• Accession: MIMAT0014412
• Description: Culex quinquefasciatus cqu-miR-2 mature miRNA
• Sequence: 53 - UAUCACAGCCAGCUUUGAAGAGC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119