Accession
MI0000421
Description
Drosophila melanogaster
dme-mir-309 precursor miRNA mir-3
Gene
family?
family?
RF00716;
mir-3
Literature search
18 open access papers mention dme-mir-309
(72 sentences)
(72 sentences)
Sequence
12706
reads,
2231
reads per million, 30 experiments
auuauaCGACAAACCUUGUUCGGUUUUGccaauuuccaagccaGCACUGGGUAAAGUUUGUCCUAuaau
((((((.(((((((.(((((((((.(((.(.........).))).))))))))).))))))).))))))
((((((.(((((((.(((((((((.(((.(.........).))).))))))))).))))))).))))))
Structure
C C U c aau
auuaua GACAAAC UUGUUCGGU UUG c u
|||||| ||||||| ||||||||| ||| | u
uaauAU CUGUUUG AAUGGGUCA Gac g c
C A C c aac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19661706-19661774 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-309
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-309-3p
| Accession | MIMAT0000401 |
| Description | Drosophila melanogaster dme-miR-309-3p mature miRNA |
| Sequence | 44 - GCACUGGGUAAAGUUUGUCCUA - 65 |
| Evidence |
experimental
cloned [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-309-5p
| Accession | MIMAT0020835 |
| Description | Drosophila melanogaster dme-miR-309-5p mature miRNA |
| Sequence | 7 - CGACAAACCUUGUUCGGUUUUG - 28 |
| Evidence | not_experimental |
| Database links |
|
References
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